Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SOX1O00570 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
SOX1O00570 ADM-208ENST00000534464 1640 ntTSL 2 BASIC19.03■□□□□ 0.64
SOX1O00570 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SOX1O00570 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SOX1O00570 CYP51A1P2-201ENST00000419457 1499 ntBASIC19.03■□□□□ 0.64
SOX1O00570 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
SOX1O00570 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
SOX1O00570 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
SOX1O00570 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SOX1O00570 FEM1AP3-201ENST00000403722 1741 ntBASIC19.03■□□□□ 0.64
SOX1O00570 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC19.03■□□□□ 0.64
SOX1O00570 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC19.03■□□□□ 0.64
SOX1O00570 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC19.03■□□□□ 0.64
SOX1O00570 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SOX1O00570 AL137060.1-201ENST00000618151 2648 ntBASIC19.03■□□□□ 0.64
SOX1O00570 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SOX1O00570 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SOX1O00570 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC19.03■□□□□ 0.64
SOX1O00570 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SOX1O00570 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC19.03■□□□□ 0.64
SOX1O00570 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SOX1O00570 WRB-204ENST00000398753 699 ntTSL 3 BASIC19.03■□□□□ 0.64
SOX1O00570 KRT17P7-201ENST00000451704 1104 ntBASIC19.03■□□□□ 0.64
SOX1O00570 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SOX1O00570 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC19.03■□□□□ 0.64
SOX1O00570 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
SOX1O00570 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SOX1O00570 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC19.03■□□□□ 0.64
SOX1O00570 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
SOX1O00570 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SOX1O00570 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC19.02■□□□□ 0.64
SOX1O00570 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC19.02■□□□□ 0.64
SOX1O00570 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
SOX1O00570 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
SOX1O00570 PGF-202ENST00000405431 666 ntTSL 5 BASIC19.02■□□□□ 0.64
SOX1O00570 AC005237.2-201ENST00000434368 219 ntBASIC19.02■□□□□ 0.64
SOX1O00570 KRT18P65-201ENST00000439811 1286 ntBASIC19.02■□□□□ 0.64
SOX1O00570 GPR53P-205ENST00000457298 1084 ntBASIC19.02■□□□□ 0.64
SOX1O00570 AC125807.1-201ENST00000483097 614 ntBASIC19.02■□□□□ 0.64
SOX1O00570 IGHV3-42-201ENST00000520410 361 ntBASIC19.02■□□□□ 0.64
SOX1O00570 AL512356.2-201ENST00000546955 174 ntBASIC19.02■□□□□ 0.64
SOX1O00570 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC19.02■□□□□ 0.64
SOX1O00570 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC19.02■□□□□ 0.64
SOX1O00570 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC19.02■□□□□ 0.64
SOX1O00570 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
SOX1O00570 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC19.02■□□□□ 0.64
SOX1O00570 TDG-209ENST00000544861 1387 ntTSL 2 BASIC19.02■□□□□ 0.64
SOX1O00570 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
SOX1O00570 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.63
SOX1O00570 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.63
SOX1O00570 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC19.02■□□□□ 0.63
SOX1O00570 AC009102.3-201ENST00000623118 1491 ntBASIC19.02■□□□□ 0.63
SOX1O00570 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
SOX1O00570 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
SOX1O00570 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC19.02■□□□□ 0.63
SOX1O00570 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC19.01■□□□□ 0.63
SOX1O00570 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SOX1O00570 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC19.01■□□□□ 0.63
SOX1O00570 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
SOX1O00570 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC19.01■□□□□ 0.63
SOX1O00570 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
SOX1O00570 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SOX1O00570 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC19.01■□□□□ 0.63
SOX1O00570 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC19.01■□□□□ 0.63
SOX1O00570 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
SOX1O00570 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SOX1O00570 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
SOX1O00570 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
SOX1O00570 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC19.01■□□□□ 0.63
SOX1O00570 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC19.01■□□□□ 0.63
SOX1O00570 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC19.01■□□□□ 0.63
SOX1O00570 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SOX1O00570 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SOX1O00570 AC069335.1-201ENST00000489972 472 ntBASIC19.01■□□□□ 0.63
SOX1O00570 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC19.01■□□□□ 0.63
SOX1O00570 KRT18P41-201ENST00000518924 1277 ntBASIC19.01■□□□□ 0.63
SOX1O00570 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC19.01■□□□□ 0.63
SOX1O00570 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC19.01■□□□□ 0.63
SOX1O00570 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SOX1O00570 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
SOX1O00570 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SOX1O00570 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SOX1O00570 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
SOX1O00570 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC19.01■□□□□ 0.63
SOX1O00570 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SOX1O00570 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
SOX1O00570 EFS-203ENST00000429593 2610 ntTSL 2 BASIC19.01■□□□□ 0.63
SOX1O00570 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SOX1O00570 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SOX1O00570 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
SOX1O00570 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
SOX1O00570 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC19■□□□□ 0.63
SOX1O00570 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
SOX1O00570 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
SOX1O00570 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC19■□□□□ 0.63
SOX1O00570 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC19■□□□□ 0.63
SOX1O00570 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC19■□□□□ 0.63
SOX1O00570 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC19■□□□□ 0.63
SOX1O00570 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC19■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms