Protein–RNA interactions for Protein: A6NNY8

USP27X, Ubiquitin carboxyl-terminal hydrolase 27, humanhuman

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP27XA6NNY8 AL138781.1-201ENST00000566567 1274 ntBASIC19.44■□□□□ 0.7
USP27XA6NNY8 AC233263.1-201ENST00000578059 224 ntBASIC19.44■□□□□ 0.7
USP27XA6NNY8 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC19.44■□□□□ 0.7
USP27XA6NNY8 AC008403.3-201ENST00000598924 454 ntBASIC19.44■□□□□ 0.7
USP27XA6NNY8 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC19.44■□□□□ 0.7
USP27XA6NNY8 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
USP27XA6NNY8 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
USP27XA6NNY8 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
USP27XA6NNY8 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
USP27XA6NNY8 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC19.44■□□□□ 0.7
USP27XA6NNY8 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
USP27XA6NNY8 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC19.44■□□□□ 0.7
USP27XA6NNY8 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
USP27XA6NNY8 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
USP27XA6NNY8 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
USP27XA6NNY8 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
USP27XA6NNY8 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
USP27XA6NNY8 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
USP27XA6NNY8 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
USP27XA6NNY8 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC19.43■□□□□ 0.7
USP27XA6NNY8 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC19.43■□□□□ 0.7
USP27XA6NNY8 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
USP27XA6NNY8 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
USP27XA6NNY8 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
USP27XA6NNY8 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC19.43■□□□□ 0.7
USP27XA6NNY8 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
USP27XA6NNY8 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC19.43■□□□□ 0.7
USP27XA6NNY8 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
USP27XA6NNY8 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC19.43■□□□□ 0.7
USP27XA6NNY8 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
USP27XA6NNY8 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC19.43■□□□□ 0.7
USP27XA6NNY8 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
USP27XA6NNY8 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
USP27XA6NNY8 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
USP27XA6NNY8 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
USP27XA6NNY8 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC19.43■□□□□ 0.7
USP27XA6NNY8 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
USP27XA6NNY8 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
USP27XA6NNY8 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
USP27XA6NNY8 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC19.43■□□□□ 0.7
USP27XA6NNY8 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
USP27XA6NNY8 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
USP27XA6NNY8 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
USP27XA6NNY8 AC132938.6-201ENST00000623828 1655 ntBASIC19.43■□□□□ 0.7
USP27XA6NNY8 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
USP27XA6NNY8 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
USP27XA6NNY8 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
USP27XA6NNY8 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
USP27XA6NNY8 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
USP27XA6NNY8 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC19.42■□□□□ 0.7
USP27XA6NNY8 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
USP27XA6NNY8 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
USP27XA6NNY8 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
USP27XA6NNY8 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
USP27XA6NNY8 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
USP27XA6NNY8 PCDHA1-201ENST00000378133 2726 ntBASIC19.42■□□□□ 0.7
USP27XA6NNY8 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
USP27XA6NNY8 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
USP27XA6NNY8 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
USP27XA6NNY8 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
USP27XA6NNY8 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
USP27XA6NNY8 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
USP27XA6NNY8 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
USP27XA6NNY8 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
USP27XA6NNY8 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
USP27XA6NNY8 PPP1R14BP5-201ENST00000440334 435 ntBASIC19.42■□□□□ 0.7
USP27XA6NNY8 MCCD1P1-208ENST00000445732 328 ntBASIC19.42■□□□□ 0.7
USP27XA6NNY8 AC006970.2-201ENST00000450065 779 ntBASIC19.42■□□□□ 0.7
USP27XA6NNY8 RPS2P4-201ENST00000476944 856 ntBASIC19.42■□□□□ 0.7
USP27XA6NNY8 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC19.42■□□□□ 0.7
USP27XA6NNY8 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
USP27XA6NNY8 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC19.42■□□□□ 0.7
USP27XA6NNY8 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC19.42■□□□□ 0.7
USP27XA6NNY8 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
USP27XA6NNY8 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC19.42■□□□□ 0.7
USP27XA6NNY8 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
USP27XA6NNY8 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
USP27XA6NNY8 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
USP27XA6NNY8 OS9-205ENST00000413095 1660 ntTSL 2 BASIC19.42■□□□□ 0.7
USP27XA6NNY8 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
USP27XA6NNY8 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
USP27XA6NNY8 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
USP27XA6NNY8 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
USP27XA6NNY8 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC19.42■□□□□ 0.7
USP27XA6NNY8 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
USP27XA6NNY8 WT1-209ENST00000530998 2421 ntTSL 2 BASIC19.42■□□□□ 0.7
USP27XA6NNY8 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
USP27XA6NNY8 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC19.42■□□□□ 0.7
USP27XA6NNY8 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
USP27XA6NNY8 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC19.41■□□□□ 0.7
USP27XA6NNY8 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
USP27XA6NNY8 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
USP27XA6NNY8 AL024508.2-201ENST00000607749 1894 ntBASIC19.41■□□□□ 0.7
USP27XA6NNY8 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
USP27XA6NNY8 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
USP27XA6NNY8 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
USP27XA6NNY8 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
USP27XA6NNY8 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
USP27XA6NNY8 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
USP27XA6NNY8 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms