Protein–RNA interactions for Protein: Q9Y5R8

TRAPPC1, Trafficking protein particle complex subunit 1, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1Q9Y5R8 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
TRAPPC1Q9Y5R8 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
TRAPPC1Q9Y5R8 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC13.69□□□□□ -0.22
TRAPPC1Q9Y5R8 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRAPPC1Q9Y5R8 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRAPPC1Q9Y5R8 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRAPPC1Q9Y5R8 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
TRAPPC1Q9Y5R8 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC13.69□□□□□ -0.22
TRAPPC1Q9Y5R8 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC13.69□□□□□ -0.22
TRAPPC1Q9Y5R8 AC008764.7-201ENST00000593779 1081 ntBASIC13.69□□□□□ -0.22
TRAPPC1Q9Y5R8 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRAPPC1Q9Y5R8 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
TRAPPC1Q9Y5R8 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
TRAPPC1Q9Y5R8 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRAPPC1Q9Y5R8 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRAPPC1Q9Y5R8 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
TRAPPC1Q9Y5R8 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
TRAPPC1Q9Y5R8 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRAPPC1Q9Y5R8 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRAPPC1Q9Y5R8 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
TRAPPC1Q9Y5R8 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC13.69□□□□□ -0.22
TRAPPC1Q9Y5R8 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
TRAPPC1Q9Y5R8 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRAPPC1Q9Y5R8 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRAPPC1Q9Y5R8 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRAPPC1Q9Y5R8 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC13.69□□□□□ -0.22
TRAPPC1Q9Y5R8 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
TRAPPC1Q9Y5R8 AC124283.5-201ENST00000624661 1809 ntBASIC13.69□□□□□ -0.22
TRAPPC1Q9Y5R8 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC13.69□□□□□ -0.22
TRAPPC1Q9Y5R8 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRAPPC1Q9Y5R8 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
TRAPPC1Q9Y5R8 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRAPPC1Q9Y5R8 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
TRAPPC1Q9Y5R8 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRAPPC1Q9Y5R8 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
TRAPPC1Q9Y5R8 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRAPPC1Q9Y5R8 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC13.68□□□□□ -0.22
TRAPPC1Q9Y5R8 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC13.68□□□□□ -0.22
TRAPPC1Q9Y5R8 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRAPPC1Q9Y5R8 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRAPPC1Q9Y5R8 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
TRAPPC1Q9Y5R8 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRAPPC1Q9Y5R8 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRAPPC1Q9Y5R8 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC13.68□□□□□ -0.22
TRAPPC1Q9Y5R8 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC13.68□□□□□ -0.22
TRAPPC1Q9Y5R8 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRAPPC1Q9Y5R8 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC13.68□□□□□ -0.22
TRAPPC1Q9Y5R8 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRAPPC1Q9Y5R8 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRAPPC1Q9Y5R8 MCRIP2P1-201ENST00000394346 511 ntBASIC13.68□□□□□ -0.22
TRAPPC1Q9Y5R8 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC13.68□□□□□ -0.22
TRAPPC1Q9Y5R8 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC13.68□□□□□ -0.22
TRAPPC1Q9Y5R8 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC13.68□□□□□ -0.22
TRAPPC1Q9Y5R8 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC13.68□□□□□ -0.22
TRAPPC1Q9Y5R8 AL591742.1-201ENST00000604433 565 ntBASIC13.68□□□□□ -0.22
TRAPPC1Q9Y5R8 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
TRAPPC1Q9Y5R8 AC068587.9-201ENST00000641814 219 ntBASIC13.68□□□□□ -0.22
TRAPPC1Q9Y5R8 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
TRAPPC1Q9Y5R8 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRAPPC1Q9Y5R8 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC13.68□□□□□ -0.22
TRAPPC1Q9Y5R8 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRAPPC1Q9Y5R8 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRAPPC1Q9Y5R8 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC13.68□□□□□ -0.22
TRAPPC1Q9Y5R8 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
TRAPPC1Q9Y5R8 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRAPPC1Q9Y5R8 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRAPPC1Q9Y5R8 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRAPPC1Q9Y5R8 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRAPPC1Q9Y5R8 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRAPPC1Q9Y5R8 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC13.68□□□□□ -0.22
TRAPPC1Q9Y5R8 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRAPPC1Q9Y5R8 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRAPPC1Q9Y5R8 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRAPPC1Q9Y5R8 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC13.67□□□□□ -0.22
TRAPPC1Q9Y5R8 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRAPPC1Q9Y5R8 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
TRAPPC1Q9Y5R8 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC13.67□□□□□ -0.22
TRAPPC1Q9Y5R8 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRAPPC1Q9Y5R8 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
TRAPPC1Q9Y5R8 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRAPPC1Q9Y5R8 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRAPPC1Q9Y5R8 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
TRAPPC1Q9Y5R8 AC023824.1-201ENST00000562945 2975 ntBASIC13.67□□□□□ -0.22
TRAPPC1Q9Y5R8 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC13.67□□□□□ -0.22
TRAPPC1Q9Y5R8 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRAPPC1Q9Y5R8 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC13.67□□□□□ -0.22
TRAPPC1Q9Y5R8 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRAPPC1Q9Y5R8 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRAPPC1Q9Y5R8 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
TRAPPC1Q9Y5R8 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC13.67□□□□□ -0.22
TRAPPC1Q9Y5R8 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC13.67□□□□□ -0.22
TRAPPC1Q9Y5R8 IRS3P-201ENST00000223076 1006 ntBASIC13.67□□□□□ -0.22
TRAPPC1Q9Y5R8 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC13.67□□□□□ -0.22
TRAPPC1Q9Y5R8 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC13.67□□□□□ -0.22
TRAPPC1Q9Y5R8 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC13.67□□□□□ -0.22
TRAPPC1Q9Y5R8 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
TRAPPC1Q9Y5R8 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC13.67□□□□□ -0.22
TRAPPC1Q9Y5R8 KRT18P55-202ENST00000578578 1546 ntBASIC13.67□□□□□ -0.22
TRAPPC1Q9Y5R8 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRAPPC1Q9Y5R8 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms