Protein–RNA interactions for Protein: Q9Y252

RNF6, E3 ubiquitin-protein ligase RNF6, humanhuman

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF6Q9Y252 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RNF6Q9Y252 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC17■□□□□ 0.31
RNF6Q9Y252 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RNF6Q9Y252 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC17■□□□□ 0.31
RNF6Q9Y252 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC17■□□□□ 0.31
RNF6Q9Y252 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RNF6Q9Y252 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
RNF6Q9Y252 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC17■□□□□ 0.31
RNF6Q9Y252 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RNF6Q9Y252 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RNF6Q9Y252 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC17■□□□□ 0.31
RNF6Q9Y252 KRT18P56-201ENST00000507275 550 ntBASIC17■□□□□ 0.31
RNF6Q9Y252 FAM86EP-206ENST00000510506 987 ntBASIC17■□□□□ 0.31
RNF6Q9Y252 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC17■□□□□ 0.31
RNF6Q9Y252 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RNF6Q9Y252 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC17■□□□□ 0.31
RNF6Q9Y252 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC17■□□□□ 0.31
RNF6Q9Y252 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC17■□□□□ 0.31
RNF6Q9Y252 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC17■□□□□ 0.31
RNF6Q9Y252 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RNF6Q9Y252 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC17■□□□□ 0.31
RNF6Q9Y252 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
RNF6Q9Y252 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RNF6Q9Y252 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC17■□□□□ 0.31
RNF6Q9Y252 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC17■□□□□ 0.31
RNF6Q9Y252 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC17■□□□□ 0.31
RNF6Q9Y252 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC17■□□□□ 0.31
RNF6Q9Y252 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
RNF6Q9Y252 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC17■□□□□ 0.31
RNF6Q9Y252 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RNF6Q9Y252 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RNF6Q9Y252 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
RNF6Q9Y252 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC17■□□□□ 0.31
RNF6Q9Y252 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC16.99■□□□□ 0.31
RNF6Q9Y252 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
RNF6Q9Y252 PCDHA12-202ENST00000613593 2588 ntBASIC16.99■□□□□ 0.31
RNF6Q9Y252 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
RNF6Q9Y252 AC012317.2-201ENST00000623305 2251 ntBASIC16.99■□□□□ 0.31
RNF6Q9Y252 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
RNF6Q9Y252 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC16.99■□□□□ 0.31
RNF6Q9Y252 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RNF6Q9Y252 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
RNF6Q9Y252 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC16.99■□□□□ 0.31
RNF6Q9Y252 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
RNF6Q9Y252 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
RNF6Q9Y252 AC009947.2-201ENST00000444014 672 ntBASIC16.99■□□□□ 0.31
RNF6Q9Y252 AL671277.2-201ENST00000458060 996 ntBASIC16.99■□□□□ 0.31
RNF6Q9Y252 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC16.99■□□□□ 0.31
RNF6Q9Y252 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC16.99■□□□□ 0.31
RNF6Q9Y252 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC16.99■□□□□ 0.31
RNF6Q9Y252 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC16.99■□□□□ 0.31
RNF6Q9Y252 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
RNF6Q9Y252 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC16.99■□□□□ 0.31
RNF6Q9Y252 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC16.99■□□□□ 0.31
RNF6Q9Y252 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
RNF6Q9Y252 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC16.99■□□□□ 0.31
RNF6Q9Y252 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC16.99■□□□□ 0.31
RNF6Q9Y252 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
RNF6Q9Y252 IER3-202ENST00000376377 1350 ntBASIC16.99■□□□□ 0.31
RNF6Q9Y252 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
RNF6Q9Y252 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC16.99■□□□□ 0.31
RNF6Q9Y252 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RNF6Q9Y252 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC16.99■□□□□ 0.31
RNF6Q9Y252 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
RNF6Q9Y252 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RNF6Q9Y252 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
RNF6Q9Y252 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RNF6Q9Y252 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
RNF6Q9Y252 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
RNF6Q9Y252 REXO1L9P-201ENST00000604264 2108 ntBASIC16.99■□□□□ 0.31
RNF6Q9Y252 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
RNF6Q9Y252 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
RNF6Q9Y252 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RNF6Q9Y252 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RNF6Q9Y252 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC16.98■□□□□ 0.31
RNF6Q9Y252 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RNF6Q9Y252 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
RNF6Q9Y252 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC16.98■□□□□ 0.31
RNF6Q9Y252 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
RNF6Q9Y252 KRT8P45-201ENST00000414328 1447 ntBASIC16.98■□□□□ 0.31
RNF6Q9Y252 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC16.98■□□□□ 0.31
RNF6Q9Y252 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
RNF6Q9Y252 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RNF6Q9Y252 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC16.98■□□□□ 0.31
RNF6Q9Y252 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
RNF6Q9Y252 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RNF6Q9Y252 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
RNF6Q9Y252 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RNF6Q9Y252 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
RNF6Q9Y252 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
RNF6Q9Y252 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC16.98■□□□□ 0.31
RNF6Q9Y252 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
RNF6Q9Y252 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
RNF6Q9Y252 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC16.98■□□□□ 0.31
RNF6Q9Y252 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC16.98■□□□□ 0.31
RNF6Q9Y252 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC16.98■□□□□ 0.31
RNF6Q9Y252 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC16.98■□□□□ 0.31
RNF6Q9Y252 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC16.98■□□□□ 0.31
RNF6Q9Y252 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC16.98■□□□□ 0.31
RNF6Q9Y252 ETFA-216ENST00000560726 942 ntTSL 3 BASIC16.98■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms