Protein–RNA interactions for Protein: Q9UHD9

UBQLN2, Ubiquilin-2, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN2Q9UHD9 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
UBQLN2Q9UHD9 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC15.27■□□□□ 0.03
UBQLN2Q9UHD9 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
UBQLN2Q9UHD9 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC15.26■□□□□ 0.03
UBQLN2Q9UHD9 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
UBQLN2Q9UHD9 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
UBQLN2Q9UHD9 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
UBQLN2Q9UHD9 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC15.26■□□□□ 0.03
UBQLN2Q9UHD9 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC15.26■□□□□ 0.03
UBQLN2Q9UHD9 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
UBQLN2Q9UHD9 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC15.26■□□□□ 0.03
UBQLN2Q9UHD9 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
UBQLN2Q9UHD9 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
UBQLN2Q9UHD9 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC15.26■□□□□ 0.03
UBQLN2Q9UHD9 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
UBQLN2Q9UHD9 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC15.26■□□□□ 0.03
UBQLN2Q9UHD9 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
UBQLN2Q9UHD9 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
UBQLN2Q9UHD9 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC15.26■□□□□ 0.03
UBQLN2Q9UHD9 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
UBQLN2Q9UHD9 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC15.26■□□□□ 0.03
UBQLN2Q9UHD9 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC15.26■□□□□ 0.03
UBQLN2Q9UHD9 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC15.26■□□□□ 0.03
UBQLN2Q9UHD9 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC15.26■□□□□ 0.03
UBQLN2Q9UHD9 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC15.26■□□□□ 0.03
UBQLN2Q9UHD9 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC15.26■□□□□ 0.03
UBQLN2Q9UHD9 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
UBQLN2Q9UHD9 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
UBQLN2Q9UHD9 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
UBQLN2Q9UHD9 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
UBQLN2Q9UHD9 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC15.26■□□□□ 0.03
UBQLN2Q9UHD9 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC15.26■□□□□ 0.03
UBQLN2Q9UHD9 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
UBQLN2Q9UHD9 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
UBQLN2Q9UHD9 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC15.26■□□□□ 0.03
UBQLN2Q9UHD9 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
UBQLN2Q9UHD9 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
UBQLN2Q9UHD9 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC15.26■□□□□ 0.03
UBQLN2Q9UHD9 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC15.26■□□□□ 0.03
UBQLN2Q9UHD9 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC15.26■□□□□ 0.03
UBQLN2Q9UHD9 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
UBQLN2Q9UHD9 GCK-209ENST00000616242 2260 ntTSL 5 BASIC15.26■□□□□ 0.03
UBQLN2Q9UHD9 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC15.25■□□□□ 0.03
UBQLN2Q9UHD9 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
UBQLN2Q9UHD9 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC15.25■□□□□ 0.03
UBQLN2Q9UHD9 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
UBQLN2Q9UHD9 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
UBQLN2Q9UHD9 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
UBQLN2Q9UHD9 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
UBQLN2Q9UHD9 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
UBQLN2Q9UHD9 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
UBQLN2Q9UHD9 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
UBQLN2Q9UHD9 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
UBQLN2Q9UHD9 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
UBQLN2Q9UHD9 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
UBQLN2Q9UHD9 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
UBQLN2Q9UHD9 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC15.25■□□□□ 0.03
UBQLN2Q9UHD9 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC15.25■□□□□ 0.03
UBQLN2Q9UHD9 OR2A1-AS1-201ENST00000462305 773 ntBASIC15.25■□□□□ 0.03
UBQLN2Q9UHD9 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC15.25■□□□□ 0.03
UBQLN2Q9UHD9 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC15.25■□□□□ 0.03
UBQLN2Q9UHD9 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC15.25■□□□□ 0.03
UBQLN2Q9UHD9 MIR4758-201ENST00000577688 71 ntBASIC15.25■□□□□ 0.03
UBQLN2Q9UHD9 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
UBQLN2Q9UHD9 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC15.25■□□□□ 0.03
UBQLN2Q9UHD9 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC15.25■□□□□ 0.03
UBQLN2Q9UHD9 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
UBQLN2Q9UHD9 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
UBQLN2Q9UHD9 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
UBQLN2Q9UHD9 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
UBQLN2Q9UHD9 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC15.25■□□□□ 0.03
UBQLN2Q9UHD9 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
UBQLN2Q9UHD9 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC15.25■□□□□ 0.03
UBQLN2Q9UHD9 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
UBQLN2Q9UHD9 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
UBQLN2Q9UHD9 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC15.25■□□□□ 0.03
UBQLN2Q9UHD9 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
UBQLN2Q9UHD9 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC15.25■□□□□ 0.03
UBQLN2Q9UHD9 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
UBQLN2Q9UHD9 NME9-203ENST00000383180 2133 ntTSL 2 BASIC15.25■□□□□ 0.03
UBQLN2Q9UHD9 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
UBQLN2Q9UHD9 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
UBQLN2Q9UHD9 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
UBQLN2Q9UHD9 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC15.24■□□□□ 0.03
UBQLN2Q9UHD9 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
UBQLN2Q9UHD9 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
UBQLN2Q9UHD9 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
UBQLN2Q9UHD9 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC15.24■□□□□ 0.03
UBQLN2Q9UHD9 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
UBQLN2Q9UHD9 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC15.24■□□□□ 0.03
UBQLN2Q9UHD9 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
UBQLN2Q9UHD9 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
UBQLN2Q9UHD9 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
UBQLN2Q9UHD9 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
UBQLN2Q9UHD9 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
UBQLN2Q9UHD9 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC15.24■□□□□ 0.03
UBQLN2Q9UHD9 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
UBQLN2Q9UHD9 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
UBQLN2Q9UHD9 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
UBQLN2Q9UHD9 KRT18P68-201ENST00000392293 1000 ntBASIC15.24■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms