Protein–RNA interactions for Protein: Q9UH73

EBF1, Transcription factor COE1, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF1Q9UH73 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
EBF1Q9UH73 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
EBF1Q9UH73 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
EBF1Q9UH73 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
EBF1Q9UH73 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
EBF1Q9UH73 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
EBF1Q9UH73 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
EBF1Q9UH73 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC18.34■□□□□ 0.53
EBF1Q9UH73 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
EBF1Q9UH73 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
EBF1Q9UH73 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC18.34■□□□□ 0.53
EBF1Q9UH73 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
EBF1Q9UH73 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC18.34■□□□□ 0.53
EBF1Q9UH73 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
EBF1Q9UH73 AC243591.1-201ENST00000452967 1364 ntBASIC18.34■□□□□ 0.53
EBF1Q9UH73 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC18.34■□□□□ 0.53
EBF1Q9UH73 AC104581.1-202ENST00000635932 2618 ntBASIC18.34■□□□□ 0.53
EBF1Q9UH73 RBM17P3-201ENST00000417687 1192 ntBASIC18.34■□□□□ 0.53
EBF1Q9UH73 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
EBF1Q9UH73 THAP5-204ENST00000438865 868 ntTSL 2 BASIC18.34■□□□□ 0.53
EBF1Q9UH73 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC18.34■□□□□ 0.53
EBF1Q9UH73 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC18.34■□□□□ 0.53
EBF1Q9UH73 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
EBF1Q9UH73 COX5A-204ENST00000567270 579 ntTSL 3 BASIC18.34■□□□□ 0.53
EBF1Q9UH73 AC139887.3-201ENST00000568585 713 ntBASIC18.34■□□□□ 0.53
EBF1Q9UH73 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC18.34■□□□□ 0.53
EBF1Q9UH73 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC18.34■□□□□ 0.53
EBF1Q9UH73 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
EBF1Q9UH73 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
EBF1Q9UH73 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
EBF1Q9UH73 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC18.34■□□□□ 0.53
EBF1Q9UH73 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC18.34■□□□□ 0.53
EBF1Q9UH73 AC099343.3-201ENST00000605834 2503 ntBASIC18.33■□□□□ 0.53
EBF1Q9UH73 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
EBF1Q9UH73 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
EBF1Q9UH73 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
EBF1Q9UH73 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
EBF1Q9UH73 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC18.33■□□□□ 0.53
EBF1Q9UH73 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
EBF1Q9UH73 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
EBF1Q9UH73 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
EBF1Q9UH73 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC18.33■□□□□ 0.53
EBF1Q9UH73 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC18.33■□□□□ 0.52
EBF1Q9UH73 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC18.33■□□□□ 0.52
EBF1Q9UH73 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
EBF1Q9UH73 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
EBF1Q9UH73 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
EBF1Q9UH73 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC18.33■□□□□ 0.52
EBF1Q9UH73 HIST2H3DP1-201ENST00000401004 416 ntBASIC18.33■□□□□ 0.52
EBF1Q9UH73 SCARNA2-201ENST00000458748 420 ntBASIC18.33■□□□□ 0.52
EBF1Q9UH73 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
EBF1Q9UH73 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC18.33■□□□□ 0.52
EBF1Q9UH73 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC18.33■□□□□ 0.52
EBF1Q9UH73 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC18.33■□□□□ 0.52
EBF1Q9UH73 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC18.33■□□□□ 0.52
EBF1Q9UH73 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
EBF1Q9UH73 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
EBF1Q9UH73 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
EBF1Q9UH73 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
EBF1Q9UH73 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC18.33■□□□□ 0.52
EBF1Q9UH73 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
EBF1Q9UH73 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
EBF1Q9UH73 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.52
EBF1Q9UH73 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
EBF1Q9UH73 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
EBF1Q9UH73 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
EBF1Q9UH73 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
EBF1Q9UH73 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC18.33■□□□□ 0.52
EBF1Q9UH73 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
EBF1Q9UH73 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC18.32■□□□□ 0.52
EBF1Q9UH73 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
EBF1Q9UH73 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
EBF1Q9UH73 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC18.32■□□□□ 0.52
EBF1Q9UH73 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC18.32■□□□□ 0.52
EBF1Q9UH73 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
EBF1Q9UH73 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC18.32■□□□□ 0.52
EBF1Q9UH73 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
EBF1Q9UH73 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
EBF1Q9UH73 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
EBF1Q9UH73 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
EBF1Q9UH73 PMS2P7-201ENST00000506558 1336 ntBASIC18.32■□□□□ 0.52
EBF1Q9UH73 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
EBF1Q9UH73 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC18.32■□□□□ 0.52
EBF1Q9UH73 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
EBF1Q9UH73 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
EBF1Q9UH73 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC18.32■□□□□ 0.52
EBF1Q9UH73 AC073648.2-201ENST00000510116 352 ntBASIC18.32■□□□□ 0.52
EBF1Q9UH73 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC18.32■□□□□ 0.52
EBF1Q9UH73 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC18.32■□□□□ 0.52
EBF1Q9UH73 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC18.32■□□□□ 0.52
EBF1Q9UH73 PRKN-208ENST00000610470 531 ntTSL 2 BASIC18.32■□□□□ 0.52
EBF1Q9UH73 PRKN-209ENST00000612485 225 ntTSL 5 BASIC18.32■□□□□ 0.52
EBF1Q9UH73 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC18.32■□□□□ 0.52
EBF1Q9UH73 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
EBF1Q9UH73 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
EBF1Q9UH73 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC18.32■□□□□ 0.52
EBF1Q9UH73 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
EBF1Q9UH73 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
EBF1Q9UH73 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
EBF1Q9UH73 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms