Protein–RNA interactions for Protein: Q9NPL8

TIMMDC1, Complex I assembly factor TIMMDC1, mitochondrial, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMMDC1Q9NPL8 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TIMMDC1Q9NPL8 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TIMMDC1Q9NPL8 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC17.36■□□□□ 0.37
TIMMDC1Q9NPL8 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
TIMMDC1Q9NPL8 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TIMMDC1Q9NPL8 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TIMMDC1Q9NPL8 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC17.36■□□□□ 0.37
TIMMDC1Q9NPL8 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
TIMMDC1Q9NPL8 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TIMMDC1Q9NPL8 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TIMMDC1Q9NPL8 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TIMMDC1Q9NPL8 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC17.36■□□□□ 0.37
TIMMDC1Q9NPL8 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TIMMDC1Q9NPL8 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TIMMDC1Q9NPL8 ANKRD20A18P-201ENST00000359341 492 ntBASIC17.36■□□□□ 0.37
TIMMDC1Q9NPL8 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TIMMDC1Q9NPL8 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TIMMDC1Q9NPL8 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC17.36■□□□□ 0.37
TIMMDC1Q9NPL8 RNF152P1-201ENST00000397754 604 ntBASIC17.36■□□□□ 0.37
TIMMDC1Q9NPL8 AC117947.1-201ENST00000427448 529 ntBASIC17.36■□□□□ 0.37
TIMMDC1Q9NPL8 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC17.36■□□□□ 0.37
TIMMDC1Q9NPL8 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC17.36■□□□□ 0.37
TIMMDC1Q9NPL8 LTBR-211ENST00000543190 785 ntTSL 3 BASIC17.36■□□□□ 0.37
TIMMDC1Q9NPL8 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC17.36■□□□□ 0.37
TIMMDC1Q9NPL8 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TIMMDC1Q9NPL8 NT5C-211ENST00000582170 653 ntTSL 3 BASIC17.36■□□□□ 0.37
TIMMDC1Q9NPL8 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC17.36■□□□□ 0.37
TIMMDC1Q9NPL8 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
TIMMDC1Q9NPL8 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC17.36■□□□□ 0.37
TIMMDC1Q9NPL8 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC17.36■□□□□ 0.37
TIMMDC1Q9NPL8 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TIMMDC1Q9NPL8 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC17.36■□□□□ 0.37
TIMMDC1Q9NPL8 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
TIMMDC1Q9NPL8 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TIMMDC1Q9NPL8 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TIMMDC1Q9NPL8 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TIMMDC1Q9NPL8 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
TIMMDC1Q9NPL8 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TIMMDC1Q9NPL8 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
TIMMDC1Q9NPL8 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC17.36■□□□□ 0.37
TIMMDC1Q9NPL8 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TIMMDC1Q9NPL8 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC17.36■□□□□ 0.37
TIMMDC1Q9NPL8 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
TIMMDC1Q9NPL8 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
TIMMDC1Q9NPL8 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TIMMDC1Q9NPL8 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
TIMMDC1Q9NPL8 CICP6-201ENST00000457191 2729 ntBASIC17.35■□□□□ 0.37
TIMMDC1Q9NPL8 GOLGA6L5P-202ENST00000515341 1828 ntBASIC17.35■□□□□ 0.37
TIMMDC1Q9NPL8 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TIMMDC1Q9NPL8 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC17.35■□□□□ 0.37
TIMMDC1Q9NPL8 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
TIMMDC1Q9NPL8 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
TIMMDC1Q9NPL8 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TIMMDC1Q9NPL8 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC17.35■□□□□ 0.37
TIMMDC1Q9NPL8 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TIMMDC1Q9NPL8 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC17.35■□□□□ 0.37
TIMMDC1Q9NPL8 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TIMMDC1Q9NPL8 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TIMMDC1Q9NPL8 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
TIMMDC1Q9NPL8 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TIMMDC1Q9NPL8 CD70-202ENST00000423145 881 ntTSL 2 BASIC17.35■□□□□ 0.37
TIMMDC1Q9NPL8 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC17.35■□□□□ 0.37
TIMMDC1Q9NPL8 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC17.35■□□□□ 0.37
TIMMDC1Q9NPL8 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TIMMDC1Q9NPL8 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC17.35■□□□□ 0.37
TIMMDC1Q9NPL8 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TIMMDC1Q9NPL8 NF2-208ENST00000403435 2568 ntTSL 5 BASIC17.35■□□□□ 0.37
TIMMDC1Q9NPL8 NKILA-202ENST00000614771 2598 ntBASIC17.35■□□□□ 0.37
TIMMDC1Q9NPL8 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TIMMDC1Q9NPL8 KRT8P45-201ENST00000414328 1447 ntBASIC17.35■□□□□ 0.37
TIMMDC1Q9NPL8 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
TIMMDC1Q9NPL8 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC17.35■□□□□ 0.37
TIMMDC1Q9NPL8 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC17.35■□□□□ 0.37
TIMMDC1Q9NPL8 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC17.35■□□□□ 0.37
TIMMDC1Q9NPL8 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TIMMDC1Q9NPL8 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
TIMMDC1Q9NPL8 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC17.35■□□□□ 0.37
TIMMDC1Q9NPL8 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
TIMMDC1Q9NPL8 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC17.35■□□□□ 0.37
TIMMDC1Q9NPL8 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC17.35■□□□□ 0.37
TIMMDC1Q9NPL8 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
TIMMDC1Q9NPL8 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TIMMDC1Q9NPL8 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC17.34■□□□□ 0.37
TIMMDC1Q9NPL8 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TIMMDC1Q9NPL8 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TIMMDC1Q9NPL8 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TIMMDC1Q9NPL8 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TIMMDC1Q9NPL8 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC17.34■□□□□ 0.37
TIMMDC1Q9NPL8 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TIMMDC1Q9NPL8 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
TIMMDC1Q9NPL8 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
TIMMDC1Q9NPL8 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TIMMDC1Q9NPL8 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
TIMMDC1Q9NPL8 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
TIMMDC1Q9NPL8 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC17.34■□□□□ 0.37
TIMMDC1Q9NPL8 AC092647.4-201ENST00000457211 535 ntBASIC17.34■□□□□ 0.37
TIMMDC1Q9NPL8 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
TIMMDC1Q9NPL8 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC17.34■□□□□ 0.37
TIMMDC1Q9NPL8 YBX1P2-201ENST00000489612 999 ntBASIC17.34■□□□□ 0.37
TIMMDC1Q9NPL8 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC17.34■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms