Protein–RNA interactions for Protein: Q9BU40

CHRDL1, Chordin-like protein 1, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL1Q9BU40 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC14.35□□□□□ -0.11
CHRDL1Q9BU40 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC14.35□□□□□ -0.11
CHRDL1Q9BU40 AC007663.1-201ENST00000438948 1240 ntBASIC14.35□□□□□ -0.11
CHRDL1Q9BU40 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CHRDL1Q9BU40 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CHRDL1Q9BU40 BX088651.1-201ENST00000540551 451 ntBASIC14.35□□□□□ -0.11
CHRDL1Q9BU40 CFL2-205ENST00000555765 632 ntTSL 2 BASIC14.35□□□□□ -0.11
CHRDL1Q9BU40 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC14.35□□□□□ -0.11
CHRDL1Q9BU40 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
CHRDL1Q9BU40 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
CHRDL1Q9BU40 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
CHRDL1Q9BU40 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CHRDL1Q9BU40 CYP2D8P-201ENST00000433633 1490 ntBASIC14.35□□□□□ -0.11
CHRDL1Q9BU40 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CHRDL1Q9BU40 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CHRDL1Q9BU40 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
CHRDL1Q9BU40 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
CHRDL1Q9BU40 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CHRDL1Q9BU40 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
CHRDL1Q9BU40 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CHRDL1Q9BU40 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
CHRDL1Q9BU40 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CHRDL1Q9BU40 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CHRDL1Q9BU40 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CHRDL1Q9BU40 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC14.34□□□□□ -0.11
CHRDL1Q9BU40 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CHRDL1Q9BU40 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CHRDL1Q9BU40 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
CHRDL1Q9BU40 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC14.34□□□□□ -0.11
CHRDL1Q9BU40 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CHRDL1Q9BU40 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CHRDL1Q9BU40 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC14.34□□□□□ -0.11
CHRDL1Q9BU40 KRT8P50-201ENST00000562022 1438 ntBASIC14.34□□□□□ -0.11
CHRDL1Q9BU40 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
CHRDL1Q9BU40 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CHRDL1Q9BU40 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CHRDL1Q9BU40 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CHRDL1Q9BU40 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CHRDL1Q9BU40 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC14.34□□□□□ -0.11
CHRDL1Q9BU40 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
CHRDL1Q9BU40 TSPY14P-201ENST00000303979 915 ntBASIC14.34□□□□□ -0.11
CHRDL1Q9BU40 INGX-201ENST00000359239 846 ntBASIC14.34□□□□□ -0.11
CHRDL1Q9BU40 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CHRDL1Q9BU40 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CHRDL1Q9BU40 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC14.34□□□□□ -0.11
CHRDL1Q9BU40 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
CHRDL1Q9BU40 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC14.34□□□□□ -0.11
CHRDL1Q9BU40 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC14.34□□□□□ -0.11
CHRDL1Q9BU40 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC14.34□□□□□ -0.11
CHRDL1Q9BU40 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CHRDL1Q9BU40 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC14.34□□□□□ -0.11
CHRDL1Q9BU40 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CHRDL1Q9BU40 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC14.34□□□□□ -0.11
CHRDL1Q9BU40 CR769767.2-201ENST00000622735 460 ntBASIC14.34□□□□□ -0.11
CHRDL1Q9BU40 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC14.34□□□□□ -0.11
CHRDL1Q9BU40 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CHRDL1Q9BU40 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC14.34□□□□□ -0.11
CHRDL1Q9BU40 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC14.34□□□□□ -0.11
CHRDL1Q9BU40 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
CHRDL1Q9BU40 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CHRDL1Q9BU40 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CHRDL1Q9BU40 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC14.34□□□□□ -0.11
CHRDL1Q9BU40 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
CHRDL1Q9BU40 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CHRDL1Q9BU40 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CHRDL1Q9BU40 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
CHRDL1Q9BU40 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CHRDL1Q9BU40 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CHRDL1Q9BU40 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC14.33□□□□□ -0.11
CHRDL1Q9BU40 AL139384.1-201ENST00000612143 3047 ntBASIC14.33□□□□□ -0.11
CHRDL1Q9BU40 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC14.33□□□□□ -0.11
CHRDL1Q9BU40 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
CHRDL1Q9BU40 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
CHRDL1Q9BU40 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
CHRDL1Q9BU40 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.11
CHRDL1Q9BU40 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CHRDL1Q9BU40 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CHRDL1Q9BU40 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
CHRDL1Q9BU40 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CHRDL1Q9BU40 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CHRDL1Q9BU40 CD276-201ENST00000318424 2738 ntTSL 5 BASIC14.33□□□□□ -0.12
CHRDL1Q9BU40 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC14.33□□□□□ -0.12
CHRDL1Q9BU40 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CHRDL1Q9BU40 MMP23A-201ENST00000234610 1017 ntBASIC14.33□□□□□ -0.12
CHRDL1Q9BU40 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC14.33□□□□□ -0.12
CHRDL1Q9BU40 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC14.33□□□□□ -0.12
CHRDL1Q9BU40 AP000593.1-201ENST00000393668 712 ntBASIC14.33□□□□□ -0.12
CHRDL1Q9BU40 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC14.33□□□□□ -0.12
CHRDL1Q9BU40 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CHRDL1Q9BU40 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CHRDL1Q9BU40 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CHRDL1Q9BU40 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CHRDL1Q9BU40 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CHRDL1Q9BU40 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
CHRDL1Q9BU40 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CHRDL1Q9BU40 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CHRDL1Q9BU40 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
CHRDL1Q9BU40 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC14.32□□□□□ -0.12
CHRDL1Q9BU40 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CHRDL1Q9BU40 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms