Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC18.2■□□□□ 0.5
PHOX2BQ99453 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC18.2■□□□□ 0.5
PHOX2BQ99453 ELL2P1-201ENST00000413990 1906 ntBASIC18.2■□□□□ 0.5
PHOX2BQ99453 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC18.2■□□□□ 0.5
PHOX2BQ99453 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PHOX2BQ99453 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
PHOX2BQ99453 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
PHOX2BQ99453 FUOM-202ENST00000368551 628 ntTSL 3 BASIC18.2■□□□□ 0.5
PHOX2BQ99453 KIRREL3-AS3-201ENST00000404882 831 ntBASIC18.2■□□□□ 0.5
PHOX2BQ99453 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC18.2■□□□□ 0.5
PHOX2BQ99453 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC18.2■□□□□ 0.5
PHOX2BQ99453 AC107918.4-202ENST00000641623 219 ntBASIC18.2■□□□□ 0.5
PHOX2BQ99453 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
PHOX2BQ99453 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
PHOX2BQ99453 HOXB1-202ENST00000577092 1414 ntBASIC18.2■□□□□ 0.5
PHOX2BQ99453 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PHOX2BQ99453 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PHOX2BQ99453 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
PHOX2BQ99453 AC097374.2-201ENST00000618617 1306 ntBASIC18.2■□□□□ 0.5
PHOX2BQ99453 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PHOX2BQ99453 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
PHOX2BQ99453 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
PHOX2BQ99453 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PHOX2BQ99453 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
PHOX2BQ99453 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PHOX2BQ99453 INTS4P1-201ENST00000438455 1935 ntBASIC18.19■□□□□ 0.5
PHOX2BQ99453 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PHOX2BQ99453 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PHOX2BQ99453 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PHOX2BQ99453 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PHOX2BQ99453 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
PHOX2BQ99453 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC18.19■□□□□ 0.5
PHOX2BQ99453 HEIH-201ENST00000623091 1652 ntBASIC18.19■□□□□ 0.5
PHOX2BQ99453 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PHOX2BQ99453 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC18.19■□□□□ 0.5
PHOX2BQ99453 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PHOX2BQ99453 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PHOX2BQ99453 BAD-202ENST00000394531 631 ntTSL 3 BASIC18.19■□□□□ 0.5
PHOX2BQ99453 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC18.19■□□□□ 0.5
PHOX2BQ99453 PON3-205ENST00000451904 1053 ntTSL 3 BASIC18.19■□□□□ 0.5
PHOX2BQ99453 SIGLEC30P-201ENST00000455569 941 ntBASIC18.19■□□□□ 0.5
PHOX2BQ99453 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC18.19■□□□□ 0.5
PHOX2BQ99453 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC18.19■□□□□ 0.5
PHOX2BQ99453 KRT8P7-201ENST00000533003 1432 ntBASIC18.19■□□□□ 0.5
PHOX2BQ99453 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC18.19■□□□□ 0.5
PHOX2BQ99453 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PHOX2BQ99453 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC18.19■□□□□ 0.5
PHOX2BQ99453 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC18.19■□□□□ 0.5
PHOX2BQ99453 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC18.19■□□□□ 0.5
PHOX2BQ99453 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC18.19■□□□□ 0.5
PHOX2BQ99453 MTDHP4-201ENST00000600287 670 ntBASIC18.19■□□□□ 0.5
PHOX2BQ99453 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PHOX2BQ99453 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PHOX2BQ99453 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PHOX2BQ99453 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC18.19■□□□□ 0.5
PHOX2BQ99453 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC18.19■□□□□ 0.5
PHOX2BQ99453 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PHOX2BQ99453 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
PHOX2BQ99453 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC18.19■□□□□ 0.5
PHOX2BQ99453 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PHOX2BQ99453 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PHOX2BQ99453 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC18.18■□□□□ 0.5
PHOX2BQ99453 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
PHOX2BQ99453 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC18.18■□□□□ 0.5
PHOX2BQ99453 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC18.18■□□□□ 0.5
PHOX2BQ99453 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC18.18■□□□□ 0.5
PHOX2BQ99453 AC004449.1-201ENST00000564240 433 ntBASIC18.18■□□□□ 0.5
PHOX2BQ99453 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC18.18■□□□□ 0.5
PHOX2BQ99453 METTL23-205ENST00000588302 925 ntTSL 5 BASIC18.18■□□□□ 0.5
PHOX2BQ99453 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC18.18■□□□□ 0.5
PHOX2BQ99453 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC18.18■□□□□ 0.5
PHOX2BQ99453 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
PHOX2BQ99453 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
PHOX2BQ99453 AC008556.1-201ENST00000610908 2040 ntBASIC18.18■□□□□ 0.5
PHOX2BQ99453 AC004408.2-201ENST00000623613 2777 ntBASIC18.18■□□□□ 0.5
PHOX2BQ99453 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC18.18■□□□□ 0.5
PHOX2BQ99453 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PHOX2BQ99453 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PHOX2BQ99453 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC18.17■□□□□ 0.5
PHOX2BQ99453 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
PHOX2BQ99453 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PHOX2BQ99453 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PHOX2BQ99453 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PHOX2BQ99453 TNXA-203ENST00000507684 2038 ntBASIC18.17■□□□□ 0.5
PHOX2BQ99453 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PHOX2BQ99453 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PHOX2BQ99453 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
PHOX2BQ99453 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PHOX2BQ99453 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
PHOX2BQ99453 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PHOX2BQ99453 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC18.17■□□□□ 0.5
PHOX2BQ99453 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
PHOX2BQ99453 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PHOX2BQ99453 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC18.17■□□□□ 0.5
PHOX2BQ99453 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
PHOX2BQ99453 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PHOX2BQ99453 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
PHOX2BQ99453 AC104417.2-201ENST00000562989 1793 ntBASIC18.17■□□□□ 0.5
PHOX2BQ99453 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
PHOX2BQ99453 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms