Protein–RNA interactions for Protein: Q96TA0

PCDHB18P, Putative protocadherin beta-18, humanhuman

Predictions only

Length 734 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB18PQ96TA0 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC19.13■□□□□ 0.65
PCDHB18PQ96TA0 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
PCDHB18PQ96TA0 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
PCDHB18PQ96TA0 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC19.12■□□□□ 0.65
PCDHB18PQ96TA0 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PCDHB18PQ96TA0 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
PCDHB18PQ96TA0 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC19.12■□□□□ 0.65
PCDHB18PQ96TA0 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC19.12■□□□□ 0.65
PCDHB18PQ96TA0 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC19.12■□□□□ 0.65
PCDHB18PQ96TA0 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
PCDHB18PQ96TA0 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC19.12■□□□□ 0.65
PCDHB18PQ96TA0 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PCDHB18PQ96TA0 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC19.12■□□□□ 0.65
PCDHB18PQ96TA0 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PCDHB18PQ96TA0 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
PCDHB18PQ96TA0 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PCDHB18PQ96TA0 TSPY5P-201ENST00000426936 936 ntBASIC19.12■□□□□ 0.65
PCDHB18PQ96TA0 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC19.12■□□□□ 0.65
PCDHB18PQ96TA0 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC19.12■□□□□ 0.65
PCDHB18PQ96TA0 AC004263.2-201ENST00000617183 678 ntBASIC19.12■□□□□ 0.65
PCDHB18PQ96TA0 HYMAI.1-201ENST00000620949 238 ntBASIC19.12■□□□□ 0.65
PCDHB18PQ96TA0 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PCDHB18PQ96TA0 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC19.12■□□□□ 0.65
PCDHB18PQ96TA0 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC19.11■□□□□ 0.65
PCDHB18PQ96TA0 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
PCDHB18PQ96TA0 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC19.11■□□□□ 0.65
PCDHB18PQ96TA0 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PCDHB18PQ96TA0 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PCDHB18PQ96TA0 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
PCDHB18PQ96TA0 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC19.11■□□□□ 0.65
PCDHB18PQ96TA0 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PCDHB18PQ96TA0 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
PCDHB18PQ96TA0 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PCDHB18PQ96TA0 COPE-203ENST00000351079 907 ntTSL 2 BASIC19.11■□□□□ 0.65
PCDHB18PQ96TA0 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PCDHB18PQ96TA0 RNF152P1-201ENST00000397754 604 ntBASIC19.11■□□□□ 0.65
PCDHB18PQ96TA0 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PCDHB18PQ96TA0 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC19.11■□□□□ 0.65
PCDHB18PQ96TA0 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PCDHB18PQ96TA0 PPOX-219ENST00000544598 813 ntTSL 2 BASIC19.11■□□□□ 0.65
PCDHB18PQ96TA0 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC19.11■□□□□ 0.65
PCDHB18PQ96TA0 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC19.11■□□□□ 0.65
PCDHB18PQ96TA0 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC19.11■□□□□ 0.65
PCDHB18PQ96TA0 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC19.11■□□□□ 0.65
PCDHB18PQ96TA0 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC19.11■□□□□ 0.65
PCDHB18PQ96TA0 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PCDHB18PQ96TA0 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
PCDHB18PQ96TA0 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PCDHB18PQ96TA0 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PCDHB18PQ96TA0 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
PCDHB18PQ96TA0 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PCDHB18PQ96TA0 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
PCDHB18PQ96TA0 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC19.11■□□□□ 0.65
PCDHB18PQ96TA0 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PCDHB18PQ96TA0 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
PCDHB18PQ96TA0 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
PCDHB18PQ96TA0 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PCDHB18PQ96TA0 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PCDHB18PQ96TA0 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PCDHB18PQ96TA0 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PCDHB18PQ96TA0 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PCDHB18PQ96TA0 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC19.1■□□□□ 0.65
PCDHB18PQ96TA0 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
PCDHB18PQ96TA0 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
PCDHB18PQ96TA0 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC19.1■□□□□ 0.65
PCDHB18PQ96TA0 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC19.1■□□□□ 0.65
PCDHB18PQ96TA0 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC19.1■□□□□ 0.65
PCDHB18PQ96TA0 LINC01023-201ENST00000606054 436 ntBASIC19.1■□□□□ 0.65
PCDHB18PQ96TA0 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC19.1■□□□□ 0.65
PCDHB18PQ96TA0 AL355312.1-201ENST00000407115 2176 ntBASIC19.1■□□□□ 0.65
PCDHB18PQ96TA0 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PCDHB18PQ96TA0 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
PCDHB18PQ96TA0 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PCDHB18PQ96TA0 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC19.1■□□□□ 0.65
PCDHB18PQ96TA0 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
PCDHB18PQ96TA0 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC19.09■□□□□ 0.65
PCDHB18PQ96TA0 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PCDHB18PQ96TA0 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
PCDHB18PQ96TA0 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
PCDHB18PQ96TA0 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PCDHB18PQ96TA0 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
PCDHB18PQ96TA0 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PCDHB18PQ96TA0 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PCDHB18PQ96TA0 AL359075.1-203ENST00000462729 1002 ntBASIC19.09■□□□□ 0.65
PCDHB18PQ96TA0 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC19.09■□□□□ 0.65
PCDHB18PQ96TA0 LITAF-220ENST00000620789 692 ntTSL 5 BASIC19.09■□□□□ 0.65
PCDHB18PQ96TA0 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
PCDHB18PQ96TA0 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC19.09■□□□□ 0.65
PCDHB18PQ96TA0 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
PCDHB18PQ96TA0 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC19.09■□□□□ 0.65
PCDHB18PQ96TA0 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
PCDHB18PQ96TA0 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
PCDHB18PQ96TA0 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PCDHB18PQ96TA0 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
PCDHB18PQ96TA0 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC19.09■□□□□ 0.65
PCDHB18PQ96TA0 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
PCDHB18PQ96TA0 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
PCDHB18PQ96TA0 KRT8P47-201ENST00000604727 1398 ntBASIC19.08■□□□□ 0.65
PCDHB18PQ96TA0 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
PCDHB18PQ96TA0 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC19.08■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms