Protein–RNA interactions for Protein: Q96T58

SPEN, Msx2-interacting protein, humanhuman

Known RBP Predictions only

Length 3,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPENQ96T58 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC16.17■□□□□ 0.18
SPENQ96T58 MIR1199-201ENST00000621445 119 ntBASIC16.17■□□□□ 0.18
SPENQ96T58 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC16.17■□□□□ 0.18
SPENQ96T58 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
SPENQ96T58 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC16.17■□□□□ 0.18
SPENQ96T58 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
SPENQ96T58 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SPENQ96T58 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SPENQ96T58 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
SPENQ96T58 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SPENQ96T58 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC16.17■□□□□ 0.18
SPENQ96T58 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SPENQ96T58 COX5A-204ENST00000567270 579 ntTSL 3 BASIC16.17■□□□□ 0.18
SPENQ96T58 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SPENQ96T58 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SPENQ96T58 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC16.17■□□□□ 0.18
SPENQ96T58 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
SPENQ96T58 GOLGA6L17P-202ENST00000614358 1398 ntBASIC16.17■□□□□ 0.18
SPENQ96T58 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SPENQ96T58 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SPENQ96T58 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
SPENQ96T58 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SPENQ96T58 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC16.16■□□□□ 0.18
SPENQ96T58 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC16.16■□□□□ 0.18
SPENQ96T58 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC16.16■□□□□ 0.18
SPENQ96T58 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SPENQ96T58 AC112698.1-201ENST00000510299 916 ntBASIC16.16■□□□□ 0.18
SPENQ96T58 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC16.16■□□□□ 0.18
SPENQ96T58 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
SPENQ96T58 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SPENQ96T58 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SPENQ96T58 AC126763.1-201ENST00000552015 2118 ntBASIC16.16■□□□□ 0.18
SPENQ96T58 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SPENQ96T58 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC16.16■□□□□ 0.18
SPENQ96T58 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SPENQ96T58 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SPENQ96T58 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SPENQ96T58 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SPENQ96T58 CFL1-202ENST00000524553 860 ntTSL 2 BASIC16.16■□□□□ 0.18
SPENQ96T58 COX5A-206ENST00000568783 571 ntTSL 3 BASIC16.16■□□□□ 0.18
SPENQ96T58 RNF151-202ENST00000569210 853 ntTSL 2 BASIC16.16■□□□□ 0.18
SPENQ96T58 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC16.16■□□□□ 0.18
SPENQ96T58 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
SPENQ96T58 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SPENQ96T58 ADM-208ENST00000534464 1640 ntTSL 2 BASIC16.16■□□□□ 0.18
SPENQ96T58 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC16.16■□□□□ 0.18
SPENQ96T58 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC16.16■□□□□ 0.18
SPENQ96T58 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC16.16■□□□□ 0.18
SPENQ96T58 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC16.16■□□□□ 0.18
SPENQ96T58 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SPENQ96T58 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SPENQ96T58 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC16.16■□□□□ 0.18
SPENQ96T58 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SPENQ96T58 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
SPENQ96T58 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
SPENQ96T58 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC16.15■□□□□ 0.18
SPENQ96T58 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SPENQ96T58 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SPENQ96T58 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC16.15■□□□□ 0.18
SPENQ96T58 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SPENQ96T58 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC16.15■□□□□ 0.18
SPENQ96T58 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC16.15■□□□□ 0.18
SPENQ96T58 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC16.15■□□□□ 0.18
SPENQ96T58 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SPENQ96T58 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
SPENQ96T58 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
SPENQ96T58 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SPENQ96T58 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC16.15■□□□□ 0.18
SPENQ96T58 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SPENQ96T58 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC16.15■□□□□ 0.18
SPENQ96T58 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SPENQ96T58 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SPENQ96T58 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SPENQ96T58 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SPENQ96T58 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
SPENQ96T58 AC093028.1-201ENST00000622998 982 ntBASIC16.15■□□□□ 0.18
SPENQ96T58 AC083906.6-201ENST00000641366 219 ntBASIC16.15■□□□□ 0.18
SPENQ96T58 AC079781.4-201ENST00000641908 219 ntBASIC16.15■□□□□ 0.18
SPENQ96T58 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SPENQ96T58 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SPENQ96T58 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC16.15■□□□□ 0.18
SPENQ96T58 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC16.14■□□□□ 0.17
SPENQ96T58 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC16.14■□□□□ 0.17
SPENQ96T58 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC16.14■□□□□ 0.17
SPENQ96T58 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC16.14■□□□□ 0.17
SPENQ96T58 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
SPENQ96T58 SIRPAP1-201ENST00000448467 1770 ntBASIC16.14■□□□□ 0.17
SPENQ96T58 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SPENQ96T58 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
SPENQ96T58 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
SPENQ96T58 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SPENQ96T58 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SPENQ96T58 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SPENQ96T58 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC16.14■□□□□ 0.17
SPENQ96T58 PUS1-205ENST00000535067 838 ntTSL 3 BASIC16.14■□□□□ 0.17
SPENQ96T58 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
SPENQ96T58 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
SPENQ96T58 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
SPENQ96T58 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC16.14■□□□□ 0.17
SPENQ96T58 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms