Protein–RNA interactions for Protein: Q96EA4

SPDL1, Protein Spindly, humanhuman

Predictions only

Length 605 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPDL1Q96EA4 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
SPDL1Q96EA4 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC17.83■□□□□ 0.44
SPDL1Q96EA4 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
SPDL1Q96EA4 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC17.83■□□□□ 0.44
SPDL1Q96EA4 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC17.83■□□□□ 0.44
SPDL1Q96EA4 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC17.83■□□□□ 0.44
SPDL1Q96EA4 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC17.83■□□□□ 0.44
SPDL1Q96EA4 UNC93B5-201ENST00000530315 699 ntBASIC17.83■□□□□ 0.44
SPDL1Q96EA4 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC17.83■□□□□ 0.44
SPDL1Q96EA4 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
SPDL1Q96EA4 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC17.83■□□□□ 0.44
SPDL1Q96EA4 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC17.83■□□□□ 0.44
SPDL1Q96EA4 GXYLT1P5-201ENST00000614548 1189 ntBASIC17.83■□□□□ 0.44
SPDL1Q96EA4 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
SPDL1Q96EA4 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC17.83■□□□□ 0.44
SPDL1Q96EA4 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC17.83■□□□□ 0.44
SPDL1Q96EA4 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
SPDL1Q96EA4 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SPDL1Q96EA4 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
SPDL1Q96EA4 GNE-204ENST00000539208 2190 ntTSL 2 BASIC17.83■□□□□ 0.44
SPDL1Q96EA4 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SPDL1Q96EA4 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SPDL1Q96EA4 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SPDL1Q96EA4 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SPDL1Q96EA4 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC17.82■□□□□ 0.44
SPDL1Q96EA4 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC17.82■□□□□ 0.44
SPDL1Q96EA4 PGR-209ENST00000617858 2816 ntTSL 5 BASIC17.82■□□□□ 0.44
SPDL1Q96EA4 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SPDL1Q96EA4 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
SPDL1Q96EA4 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SPDL1Q96EA4 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
SPDL1Q96EA4 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SPDL1Q96EA4 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SPDL1Q96EA4 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC17.82■□□□□ 0.44
SPDL1Q96EA4 PKD1P5-201ENST00000532415 10291 ntBASIC17.82■□□□□ 0.44
SPDL1Q96EA4 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SPDL1Q96EA4 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC17.82■□□□□ 0.44
SPDL1Q96EA4 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
SPDL1Q96EA4 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SPDL1Q96EA4 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
SPDL1Q96EA4 AL109923.1-201ENST00000618799 583 ntBASIC17.82■□□□□ 0.44
SPDL1Q96EA4 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SPDL1Q96EA4 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SPDL1Q96EA4 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SPDL1Q96EA4 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC17.82■□□□□ 0.44
SPDL1Q96EA4 FLYWCH1P1-201ENST00000460917 1874 ntBASIC17.82■□□□□ 0.44
SPDL1Q96EA4 AL136379.1-201ENST00000623471 2642 ntBASIC17.82■□□□□ 0.44
SPDL1Q96EA4 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC17.81■□□□□ 0.44
SPDL1Q96EA4 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SPDL1Q96EA4 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SPDL1Q96EA4 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SPDL1Q96EA4 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SPDL1Q96EA4 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
SPDL1Q96EA4 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC17.81■□□□□ 0.44
SPDL1Q96EA4 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SPDL1Q96EA4 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
SPDL1Q96EA4 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC17.81■□□□□ 0.44
SPDL1Q96EA4 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
SPDL1Q96EA4 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC17.81■□□□□ 0.44
SPDL1Q96EA4 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SPDL1Q96EA4 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
SPDL1Q96EA4 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SPDL1Q96EA4 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SPDL1Q96EA4 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SPDL1Q96EA4 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC17.81■□□□□ 0.44
SPDL1Q96EA4 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SPDL1Q96EA4 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SPDL1Q96EA4 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SPDL1Q96EA4 PRSS44-201ENST00000515154 1146 ntBASIC17.81■□□□□ 0.44
SPDL1Q96EA4 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC17.81■□□□□ 0.44
SPDL1Q96EA4 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC17.81■□□□□ 0.44
SPDL1Q96EA4 AC008403.3-201ENST00000598924 454 ntBASIC17.81■□□□□ 0.44
SPDL1Q96EA4 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC17.81■□□□□ 0.44
SPDL1Q96EA4 MTDHP1-201ENST00000605323 784 ntBASIC17.81■□□□□ 0.44
SPDL1Q96EA4 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC17.81■□□□□ 0.44
SPDL1Q96EA4 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SPDL1Q96EA4 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
SPDL1Q96EA4 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SPDL1Q96EA4 FUK-207ENST00000571514 3054 ntTSL 2 BASIC17.81■□□□□ 0.44
SPDL1Q96EA4 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
SPDL1Q96EA4 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SPDL1Q96EA4 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC17.81■□□□□ 0.44
SPDL1Q96EA4 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SPDL1Q96EA4 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC17.81■□□□□ 0.44
SPDL1Q96EA4 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
SPDL1Q96EA4 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SPDL1Q96EA4 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SPDL1Q96EA4 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SPDL1Q96EA4 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SPDL1Q96EA4 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SPDL1Q96EA4 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SPDL1Q96EA4 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SPDL1Q96EA4 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SPDL1Q96EA4 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
SPDL1Q96EA4 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
SPDL1Q96EA4 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SPDL1Q96EA4 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC17.8■□□□□ 0.44
SPDL1Q96EA4 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SPDL1Q96EA4 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SPDL1Q96EA4 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC17.8■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms