Protein–RNA interactions for Protein: Q96BH1

RNF25, E3 ubiquitin-protein ligase RNF25, humanhuman

Predicted RBP Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF25Q96BH1 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RNF25Q96BH1 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC18.98■□□□□ 0.63
RNF25Q96BH1 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
RNF25Q96BH1 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC18.98■□□□□ 0.63
RNF25Q96BH1 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC18.98■□□□□ 0.63
RNF25Q96BH1 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RNF25Q96BH1 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
RNF25Q96BH1 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RNF25Q96BH1 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
RNF25Q96BH1 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC18.98■□□□□ 0.63
RNF25Q96BH1 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RNF25Q96BH1 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
RNF25Q96BH1 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RNF25Q96BH1 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RNF25Q96BH1 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC18.98■□□□□ 0.63
RNF25Q96BH1 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
RNF25Q96BH1 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RNF25Q96BH1 PCDHA12-202ENST00000613593 2588 ntBASIC18.97■□□□□ 0.63
RNF25Q96BH1 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RNF25Q96BH1 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RNF25Q96BH1 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RNF25Q96BH1 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RNF25Q96BH1 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC18.97■□□□□ 0.63
RNF25Q96BH1 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
RNF25Q96BH1 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RNF25Q96BH1 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
RNF25Q96BH1 AC093010.1-201ENST00000473625 1624 ntBASIC18.97■□□□□ 0.63
RNF25Q96BH1 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
RNF25Q96BH1 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC18.97■□□□□ 0.63
RNF25Q96BH1 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC18.97■□□□□ 0.63
RNF25Q96BH1 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
RNF25Q96BH1 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RNF25Q96BH1 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RNF25Q96BH1 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
RNF25Q96BH1 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
RNF25Q96BH1 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RNF25Q96BH1 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RNF25Q96BH1 CRAT-202ENST00000393384 973 ntTSL 2 BASIC18.97■□□□□ 0.63
RNF25Q96BH1 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
RNF25Q96BH1 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
RNF25Q96BH1 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC18.97■□□□□ 0.63
RNF25Q96BH1 SEC1P-202ENST00000473944 940 ntBASIC18.97■□□□□ 0.63
RNF25Q96BH1 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC18.97■□□□□ 0.63
RNF25Q96BH1 AC115837.2-201ENST00000522127 677 ntTSL 3 BASIC18.97■□□□□ 0.63
RNF25Q96BH1 AC009065.1-201ENST00000564055 1225 ntBASIC18.97■□□□□ 0.63
RNF25Q96BH1 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC18.97■□□□□ 0.63
RNF25Q96BH1 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RNF25Q96BH1 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RNF25Q96BH1 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RNF25Q96BH1 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC18.97■□□□□ 0.63
RNF25Q96BH1 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RNF25Q96BH1 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
RNF25Q96BH1 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
RNF25Q96BH1 AC012317.2-201ENST00000623305 2251 ntBASIC18.97■□□□□ 0.63
RNF25Q96BH1 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC18.97■□□□□ 0.63
RNF25Q96BH1 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RNF25Q96BH1 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC18.96■□□□□ 0.63
RNF25Q96BH1 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC18.96■□□□□ 0.63
RNF25Q96BH1 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC18.96■□□□□ 0.63
RNF25Q96BH1 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
RNF25Q96BH1 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
RNF25Q96BH1 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
RNF25Q96BH1 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC18.96■□□□□ 0.63
RNF25Q96BH1 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC18.96■□□□□ 0.63
RNF25Q96BH1 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
RNF25Q96BH1 Telomerase-vert.1-201ENST00000363312 438 ntBASIC18.96■□□□□ 0.63
RNF25Q96BH1 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
RNF25Q96BH1 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
RNF25Q96BH1 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RNF25Q96BH1 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RNF25Q96BH1 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
RNF25Q96BH1 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RNF25Q96BH1 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC18.96■□□□□ 0.63
RNF25Q96BH1 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RNF25Q96BH1 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RNF25Q96BH1 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
RNF25Q96BH1 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RNF25Q96BH1 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RNF25Q96BH1 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC18.96■□□□□ 0.63
RNF25Q96BH1 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RNF25Q96BH1 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
RNF25Q96BH1 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RNF25Q96BH1 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
RNF25Q96BH1 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
RNF25Q96BH1 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
RNF25Q96BH1 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC18.95■□□□□ 0.62
RNF25Q96BH1 AC080080.1-201ENST00000625121 2420 ntBASIC18.95■□□□□ 0.62
RNF25Q96BH1 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RNF25Q96BH1 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
RNF25Q96BH1 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC18.95■□□□□ 0.62
RNF25Q96BH1 HLA-DQB1-201ENST00000374943 1656 ntBASIC18.95■□□□□ 0.62
RNF25Q96BH1 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
RNF25Q96BH1 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC18.95■□□□□ 0.62
RNF25Q96BH1 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RNF25Q96BH1 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC18.95■□□□□ 0.62
RNF25Q96BH1 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RNF25Q96BH1 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
RNF25Q96BH1 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
RNF25Q96BH1 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC18.95■□□□□ 0.62
RNF25Q96BH1 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms