Protein–RNA interactions for Protein: Q8WVM7

STAG1, Cohesin subunit SA-1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
STAG1Q8WVM7 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
STAG1Q8WVM7 LETM1P2-201ENST00000597330 2178 ntBASIC21.21■□□□□ 0.99
STAG1Q8WVM7 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
STAG1Q8WVM7 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
STAG1Q8WVM7 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
STAG1Q8WVM7 AC100803.2-201ENST00000562459 1963 ntBASIC21.21■□□□□ 0.99
STAG1Q8WVM7 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
STAG1Q8WVM7 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
STAG1Q8WVM7 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC21.21■□□□□ 0.99
STAG1Q8WVM7 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC21.21■□□□□ 0.99
STAG1Q8WVM7 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
STAG1Q8WVM7 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC21.21■□□□□ 0.99
STAG1Q8WVM7 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
STAG1Q8WVM7 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
STAG1Q8WVM7 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
STAG1Q8WVM7 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC21.21■□□□□ 0.99
STAG1Q8WVM7 IGHV3-47-201ENST00000425060 335 ntBASIC21.21■□□□□ 0.99
STAG1Q8WVM7 VENTXP7-201ENST00000475503 772 ntBASIC21.21■□□□□ 0.99
STAG1Q8WVM7 PP7080-204ENST00000510714 601 ntTSL 3 BASIC21.21■□□□□ 0.99
STAG1Q8WVM7 AP000867.3-201ENST00000524675 377 ntBASIC21.21■□□□□ 0.99
STAG1Q8WVM7 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC21.21■□□□□ 0.99
STAG1Q8WVM7 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC21.21■□□□□ 0.99
STAG1Q8WVM7 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
STAG1Q8WVM7 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
STAG1Q8WVM7 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
STAG1Q8WVM7 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
STAG1Q8WVM7 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC21.21■□□□□ 0.99
STAG1Q8WVM7 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC21.21■□□□□ 0.99
STAG1Q8WVM7 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
STAG1Q8WVM7 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
STAG1Q8WVM7 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC21.21■□□□□ 0.99
STAG1Q8WVM7 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
STAG1Q8WVM7 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC21.2■□□□□ 0.99
STAG1Q8WVM7 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
STAG1Q8WVM7 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC21.2■□□□□ 0.98
STAG1Q8WVM7 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC21.2■□□□□ 0.98
STAG1Q8WVM7 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
STAG1Q8WVM7 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC21.2■□□□□ 0.98
STAG1Q8WVM7 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC21.2■□□□□ 0.98
STAG1Q8WVM7 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC21.2■□□□□ 0.98
STAG1Q8WVM7 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
STAG1Q8WVM7 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
STAG1Q8WVM7 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC21.2■□□□□ 0.98
STAG1Q8WVM7 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
STAG1Q8WVM7 KRT17P6-201ENST00000453795 1220 ntBASIC21.2■□□□□ 0.98
STAG1Q8WVM7 CDV3-207ENST00000508481 661 ntTSL 3 BASIC21.2■□□□□ 0.98
STAG1Q8WVM7 ABR-204ENST00000543210 1049 ntTSL 2 BASIC21.2■□□□□ 0.98
STAG1Q8WVM7 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
STAG1Q8WVM7 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC21.2■□□□□ 0.98
STAG1Q8WVM7 AC012615.1-201ENST00000565797 1299 ntBASIC21.2■□□□□ 0.98
STAG1Q8WVM7 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC21.2■□□□□ 0.98
STAG1Q8WVM7 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC21.2■□□□□ 0.98
STAG1Q8WVM7 ABR-217ENST00000572441 563 ntTSL 4 BASIC21.2■□□□□ 0.98
STAG1Q8WVM7 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC21.2■□□□□ 0.98
STAG1Q8WVM7 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
STAG1Q8WVM7 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC21.2■□□□□ 0.98
STAG1Q8WVM7 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC21.2■□□□□ 0.98
STAG1Q8WVM7 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC21.2■□□□□ 0.98
STAG1Q8WVM7 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
STAG1Q8WVM7 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
STAG1Q8WVM7 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
STAG1Q8WVM7 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
STAG1Q8WVM7 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC21.2■□□□□ 0.98
STAG1Q8WVM7 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC21.19■□□□□ 0.98
STAG1Q8WVM7 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC21.19■□□□□ 0.98
STAG1Q8WVM7 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
STAG1Q8WVM7 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
STAG1Q8WVM7 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
STAG1Q8WVM7 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC21.19■□□□□ 0.98
STAG1Q8WVM7 AC026471.1-201ENST00000564629 3026 ntBASIC21.19■□□□□ 0.98
STAG1Q8WVM7 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
STAG1Q8WVM7 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
STAG1Q8WVM7 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
STAG1Q8WVM7 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
STAG1Q8WVM7 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
STAG1Q8WVM7 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
STAG1Q8WVM7 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
STAG1Q8WVM7 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC21.19■□□□□ 0.98
STAG1Q8WVM7 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
STAG1Q8WVM7 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC21.19■□□□□ 0.98
STAG1Q8WVM7 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC21.19■□□□□ 0.98
STAG1Q8WVM7 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC21.19■□□□□ 0.98
STAG1Q8WVM7 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC21.19■□□□□ 0.98
STAG1Q8WVM7 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
STAG1Q8WVM7 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC21.19■□□□□ 0.98
STAG1Q8WVM7 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
STAG1Q8WVM7 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
STAG1Q8WVM7 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC21.19■□□□□ 0.98
STAG1Q8WVM7 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
STAG1Q8WVM7 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
STAG1Q8WVM7 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
STAG1Q8WVM7 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC21.19■□□□□ 0.98
STAG1Q8WVM7 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
STAG1Q8WVM7 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC21.19■□□□□ 0.98
STAG1Q8WVM7 KRT18P55-202ENST00000578578 1546 ntBASIC21.19■□□□□ 0.98
STAG1Q8WVM7 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
STAG1Q8WVM7 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC21.19■□□□□ 0.98
STAG1Q8WVM7 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC21.19■□□□□ 0.98
STAG1Q8WVM7 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC21.18■□□□□ 0.98
STAG1Q8WVM7 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms