Protein–RNA interactions for Protein: Q8TCY0

SMIM11B, Small integral membrane protein 11B, humanhuman

Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11BQ8TCY0 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC11.74□□□□□ -0.53
SMIM11BQ8TCY0 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC11.74□□□□□ -0.53
SMIM11BQ8TCY0 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
SMIM11BQ8TCY0 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC11.74□□□□□ -0.53
SMIM11BQ8TCY0 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC11.74□□□□□ -0.53
SMIM11BQ8TCY0 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
SMIM11BQ8TCY0 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC11.74□□□□□ -0.53
SMIM11BQ8TCY0 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC11.74□□□□□ -0.53
SMIM11BQ8TCY0 AGGF1P2-201ENST00000426656 2106 ntBASIC11.74□□□□□ -0.53
SMIM11BQ8TCY0 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC11.74□□□□□ -0.53
SMIM11BQ8TCY0 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC11.74□□□□□ -0.53
SMIM11BQ8TCY0 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC11.74□□□□□ -0.53
SMIM11BQ8TCY0 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
SMIM11BQ8TCY0 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
SMIM11BQ8TCY0 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
SMIM11BQ8TCY0 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
SMIM11BQ8TCY0 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
SMIM11BQ8TCY0 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
SMIM11BQ8TCY0 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
SMIM11BQ8TCY0 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC11.73□□□□□ -0.53
SMIM11BQ8TCY0 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
SMIM11BQ8TCY0 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC11.73□□□□□ -0.53
SMIM11BQ8TCY0 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
SMIM11BQ8TCY0 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
SMIM11BQ8TCY0 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
SMIM11BQ8TCY0 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
SMIM11BQ8TCY0 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC11.73□□□□□ -0.53
SMIM11BQ8TCY0 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC11.73□□□□□ -0.53
SMIM11BQ8TCY0 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
SMIM11BQ8TCY0 AC133963.1-201ENST00000504166 1679 ntBASIC11.73□□□□□ -0.53
SMIM11BQ8TCY0 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC11.73□□□□□ -0.53
SMIM11BQ8TCY0 KRT18P41-201ENST00000518924 1277 ntBASIC11.73□□□□□ -0.53
SMIM11BQ8TCY0 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC11.73□□□□□ -0.53
SMIM11BQ8TCY0 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC11.73□□□□□ -0.53
SMIM11BQ8TCY0 RHOD-202ENST00000532559 538 ntTSL 3 BASIC11.73□□□□□ -0.53
SMIM11BQ8TCY0 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC11.73□□□□□ -0.53
SMIM11BQ8TCY0 KRT8P41-201ENST00000533985 1514 ntBASIC11.73□□□□□ -0.53
SMIM11BQ8TCY0 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
SMIM11BQ8TCY0 CFL2-205ENST00000555765 632 ntTSL 2 BASIC11.73□□□□□ -0.53
SMIM11BQ8TCY0 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC11.73□□□□□ -0.53
SMIM11BQ8TCY0 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC11.73□□□□□ -0.53
SMIM11BQ8TCY0 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC11.73□□□□□ -0.53
SMIM11BQ8TCY0 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC11.73□□□□□ -0.53
SMIM11BQ8TCY0 TPR-209ENST00000613151 2478 ntTSL 5 BASIC11.73□□□□□ -0.53
SMIM11BQ8TCY0 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC11.73□□□□□ -0.53
SMIM11BQ8TCY0 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
SMIM11BQ8TCY0 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
SMIM11BQ8TCY0 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
SMIM11BQ8TCY0 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC11.73□□□□□ -0.53
SMIM11BQ8TCY0 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
SMIM11BQ8TCY0 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
SMIM11BQ8TCY0 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
SMIM11BQ8TCY0 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
SMIM11BQ8TCY0 AL596257.1-201ENST00000641463 2694 ntBASIC11.73□□□□□ -0.53
SMIM11BQ8TCY0 FLJ38576-201ENST00000623820 2459 ntBASIC11.72□□□□□ -0.53
SMIM11BQ8TCY0 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC11.72□□□□□ -0.53
SMIM11BQ8TCY0 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC11.72□□□□□ -0.53
SMIM11BQ8TCY0 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
SMIM11BQ8TCY0 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC11.72□□□□□ -0.53
SMIM11BQ8TCY0 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
SMIM11BQ8TCY0 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC11.72□□□□□ -0.53
SMIM11BQ8TCY0 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC11.72□□□□□ -0.53
SMIM11BQ8TCY0 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
SMIM11BQ8TCY0 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC11.72□□□□□ -0.53
SMIM11BQ8TCY0 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
SMIM11BQ8TCY0 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
SMIM11BQ8TCY0 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
SMIM11BQ8TCY0 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
SMIM11BQ8TCY0 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
SMIM11BQ8TCY0 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
SMIM11BQ8TCY0 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
SMIM11BQ8TCY0 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC11.72□□□□□ -0.53
SMIM11BQ8TCY0 RGMA-211ENST00000557420 989 ntTSL 3 BASIC11.72□□□□□ -0.53
SMIM11BQ8TCY0 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC11.72□□□□□ -0.53
SMIM11BQ8TCY0 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC11.72□□□□□ -0.53
SMIM11BQ8TCY0 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC11.72□□□□□ -0.53
SMIM11BQ8TCY0 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC11.72□□□□□ -0.53
SMIM11BQ8TCY0 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
SMIM11BQ8TCY0 AC092437.1-201ENST00000624794 1048 ntBASIC11.72□□□□□ -0.53
SMIM11BQ8TCY0 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
SMIM11BQ8TCY0 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
SMIM11BQ8TCY0 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
SMIM11BQ8TCY0 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
SMIM11BQ8TCY0 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
SMIM11BQ8TCY0 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC11.72□□□□□ -0.53
SMIM11BQ8TCY0 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC11.72□□□□□ -0.53
SMIM11BQ8TCY0 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC11.72□□□□□ -0.53
SMIM11BQ8TCY0 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
SMIM11BQ8TCY0 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC11.72□□□□□ -0.53
SMIM11BQ8TCY0 SP100-208ENST00000427101 1922 ntTSL 2 BASIC11.72□□□□□ -0.53
SMIM11BQ8TCY0 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC11.72□□□□□ -0.53
SMIM11BQ8TCY0 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
SMIM11BQ8TCY0 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
SMIM11BQ8TCY0 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.53
SMIM11BQ8TCY0 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
SMIM11BQ8TCY0 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
SMIM11BQ8TCY0 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
SMIM11BQ8TCY0 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
SMIM11BQ8TCY0 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
SMIM11BQ8TCY0 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 63.1 ms