Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
HERC6Q8IVU3 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
HERC6Q8IVU3 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
HERC6Q8IVU3 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
HERC6Q8IVU3 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
HERC6Q8IVU3 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
HERC6Q8IVU3 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC19.47■□□□□ 0.71
HERC6Q8IVU3 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC19.47■□□□□ 0.71
HERC6Q8IVU3 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC19.47■□□□□ 0.71
HERC6Q8IVU3 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
HERC6Q8IVU3 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
HERC6Q8IVU3 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC19.47■□□□□ 0.71
HERC6Q8IVU3 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
HERC6Q8IVU3 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC19.46■□□□□ 0.71
HERC6Q8IVU3 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
HERC6Q8IVU3 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
HERC6Q8IVU3 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
HERC6Q8IVU3 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
HERC6Q8IVU3 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
HERC6Q8IVU3 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
HERC6Q8IVU3 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
HERC6Q8IVU3 SRP19-202ENST00000445150 833 ntTSL 2 BASIC19.46■□□□□ 0.71
HERC6Q8IVU3 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC19.46■□□□□ 0.71
HERC6Q8IVU3 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC19.46■□□□□ 0.71
HERC6Q8IVU3 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC19.46■□□□□ 0.71
HERC6Q8IVU3 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC19.46■□□□□ 0.71
HERC6Q8IVU3 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
HERC6Q8IVU3 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
HERC6Q8IVU3 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
HERC6Q8IVU3 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
HERC6Q8IVU3 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
HERC6Q8IVU3 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
HERC6Q8IVU3 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
HERC6Q8IVU3 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
HERC6Q8IVU3 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC19.46■□□□□ 0.71
HERC6Q8IVU3 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
HERC6Q8IVU3 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HERC6Q8IVU3 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
HERC6Q8IVU3 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HERC6Q8IVU3 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
HERC6Q8IVU3 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
HERC6Q8IVU3 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HERC6Q8IVU3 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
HERC6Q8IVU3 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
HERC6Q8IVU3 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC19.45■□□□□ 0.7
HERC6Q8IVU3 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC19.45■□□□□ 0.7
HERC6Q8IVU3 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
HERC6Q8IVU3 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HERC6Q8IVU3 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HERC6Q8IVU3 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
HERC6Q8IVU3 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC19.45■□□□□ 0.7
HERC6Q8IVU3 AP006288.1-201ENST00000446065 395 ntBASIC19.45■□□□□ 0.7
HERC6Q8IVU3 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC19.45■□□□□ 0.7
HERC6Q8IVU3 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC19.45■□□□□ 0.7
HERC6Q8IVU3 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC19.45■□□□□ 0.7
HERC6Q8IVU3 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HERC6Q8IVU3 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC19.45■□□□□ 0.7
HERC6Q8IVU3 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
HERC6Q8IVU3 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HERC6Q8IVU3 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HERC6Q8IVU3 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HERC6Q8IVU3 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
HERC6Q8IVU3 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC19.45■□□□□ 0.7
HERC6Q8IVU3 KRT18P28-201ENST00000453838 1332 ntBASIC19.45■□□□□ 0.7
HERC6Q8IVU3 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
HERC6Q8IVU3 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HERC6Q8IVU3 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HERC6Q8IVU3 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
HERC6Q8IVU3 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
HERC6Q8IVU3 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
HERC6Q8IVU3 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HERC6Q8IVU3 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
HERC6Q8IVU3 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
HERC6Q8IVU3 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
HERC6Q8IVU3 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
HERC6Q8IVU3 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC19.44■□□□□ 0.7
HERC6Q8IVU3 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC19.44■□□□□ 0.7
HERC6Q8IVU3 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC19.44■□□□□ 0.7
HERC6Q8IVU3 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC19.44■□□□□ 0.7
HERC6Q8IVU3 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
HERC6Q8IVU3 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC19.44■□□□□ 0.7
HERC6Q8IVU3 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC19.44■□□□□ 0.7
HERC6Q8IVU3 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC19.44■□□□□ 0.7
HERC6Q8IVU3 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC19.44■□□□□ 0.7
HERC6Q8IVU3 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC19.44■□□□□ 0.7
HERC6Q8IVU3 AP000867.4-201ENST00000641616 219 ntBASIC19.44■□□□□ 0.7
HERC6Q8IVU3 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
HERC6Q8IVU3 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
HERC6Q8IVU3 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
HERC6Q8IVU3 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC19.44■□□□□ 0.7
HERC6Q8IVU3 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
HERC6Q8IVU3 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
HERC6Q8IVU3 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
HERC6Q8IVU3 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC19.44■□□□□ 0.7
HERC6Q8IVU3 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC19.44■□□□□ 0.7
HERC6Q8IVU3 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
HERC6Q8IVU3 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
HERC6Q8IVU3 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HERC6Q8IVU3 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC19.43■□□□□ 0.7
HERC6Q8IVU3 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms