Protein–RNA interactions for Protein: Q8IV50

LYSMD2, LysM and putative peptidoglycan-binding domain-containing protein 2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2Q8IV50 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
LYSMD2Q8IV50 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LYSMD2Q8IV50 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
LYSMD2Q8IV50 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC15.85■□□□□ 0.13
LYSMD2Q8IV50 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC15.85■□□□□ 0.13
LYSMD2Q8IV50 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LYSMD2Q8IV50 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
LYSMD2Q8IV50 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC15.85■□□□□ 0.13
LYSMD2Q8IV50 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
LYSMD2Q8IV50 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC15.85■□□□□ 0.13
LYSMD2Q8IV50 BX276092.2-201ENST00000417668 665 ntBASIC15.85■□□□□ 0.13
LYSMD2Q8IV50 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC15.85■□□□□ 0.13
LYSMD2Q8IV50 PNN-205ENST00000556530 601 ntTSL 2 BASIC15.85■□□□□ 0.13
LYSMD2Q8IV50 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
LYSMD2Q8IV50 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
LYSMD2Q8IV50 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC15.85■□□□□ 0.13
LYSMD2Q8IV50 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC15.85■□□□□ 0.13
LYSMD2Q8IV50 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
LYSMD2Q8IV50 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
LYSMD2Q8IV50 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC15.85■□□□□ 0.13
LYSMD2Q8IV50 AC022188.1-201ENST00000620960 1664 ntBASIC15.85■□□□□ 0.13
LYSMD2Q8IV50 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
LYSMD2Q8IV50 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
LYSMD2Q8IV50 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LYSMD2Q8IV50 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
LYSMD2Q8IV50 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
LYSMD2Q8IV50 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC15.85■□□□□ 0.13
LYSMD2Q8IV50 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LYSMD2Q8IV50 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
LYSMD2Q8IV50 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
LYSMD2Q8IV50 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LYSMD2Q8IV50 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
LYSMD2Q8IV50 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC15.84■□□□□ 0.13
LYSMD2Q8IV50 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
LYSMD2Q8IV50 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
LYSMD2Q8IV50 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC15.84■□□□□ 0.13
LYSMD2Q8IV50 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LYSMD2Q8IV50 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC15.84■□□□□ 0.13
LYSMD2Q8IV50 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
LYSMD2Q8IV50 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
LYSMD2Q8IV50 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LYSMD2Q8IV50 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
LYSMD2Q8IV50 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC15.84■□□□□ 0.13
LYSMD2Q8IV50 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LYSMD2Q8IV50 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LYSMD2Q8IV50 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC15.84■□□□□ 0.13
LYSMD2Q8IV50 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC15.84■□□□□ 0.13
LYSMD2Q8IV50 OR2A1-AS1-201ENST00000462305 773 ntBASIC15.84■□□□□ 0.13
LYSMD2Q8IV50 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC15.84■□□□□ 0.13
LYSMD2Q8IV50 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC15.84■□□□□ 0.13
LYSMD2Q8IV50 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC15.84■□□□□ 0.13
LYSMD2Q8IV50 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC15.84■□□□□ 0.13
LYSMD2Q8IV50 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LYSMD2Q8IV50 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
LYSMD2Q8IV50 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC15.84■□□□□ 0.13
LYSMD2Q8IV50 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
LYSMD2Q8IV50 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LYSMD2Q8IV50 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC15.84■□□□□ 0.13
LYSMD2Q8IV50 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
LYSMD2Q8IV50 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC15.84■□□□□ 0.13
LYSMD2Q8IV50 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LYSMD2Q8IV50 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC15.83■□□□□ 0.13
LYSMD2Q8IV50 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
LYSMD2Q8IV50 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.13
LYSMD2Q8IV50 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
LYSMD2Q8IV50 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.13
LYSMD2Q8IV50 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
LYSMD2Q8IV50 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
LYSMD2Q8IV50 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
LYSMD2Q8IV50 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
LYSMD2Q8IV50 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
LYSMD2Q8IV50 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
LYSMD2Q8IV50 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
LYSMD2Q8IV50 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC15.83■□□□□ 0.12
LYSMD2Q8IV50 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
LYSMD2Q8IV50 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC15.83■□□□□ 0.12
LYSMD2Q8IV50 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC15.83■□□□□ 0.12
LYSMD2Q8IV50 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
LYSMD2Q8IV50 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC15.83■□□□□ 0.12
LYSMD2Q8IV50 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC15.83■□□□□ 0.12
LYSMD2Q8IV50 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC15.83■□□□□ 0.12
LYSMD2Q8IV50 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
LYSMD2Q8IV50 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
LYSMD2Q8IV50 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
LYSMD2Q8IV50 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
LYSMD2Q8IV50 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
LYSMD2Q8IV50 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
LYSMD2Q8IV50 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC15.83■□□□□ 0.12
LYSMD2Q8IV50 AC105917.1-201ENST00000506637 2539 ntBASIC15.83■□□□□ 0.12
LYSMD2Q8IV50 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC15.83■□□□□ 0.12
LYSMD2Q8IV50 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC15.82■□□□□ 0.12
LYSMD2Q8IV50 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
LYSMD2Q8IV50 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
LYSMD2Q8IV50 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
LYSMD2Q8IV50 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
LYSMD2Q8IV50 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
LYSMD2Q8IV50 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC15.82■□□□□ 0.12
LYSMD2Q8IV50 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC15.82■□□□□ 0.12
LYSMD2Q8IV50 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC15.82■□□□□ 0.12
LYSMD2Q8IV50 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms