Protein–RNA interactions for Protein: Q86T23

CROCCP2, Putative ciliary rootlet coiled-coil protein-like 1 protein, humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP2Q86T23 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CROCCP2Q86T23 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CROCCP2Q86T23 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CROCCP2Q86T23 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CROCCP2Q86T23 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CROCCP2Q86T23 AL023284.2-201ENST00000405850 579 ntBASIC18.33■□□□□ 0.52
CROCCP2Q86T23 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
CROCCP2Q86T23 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
CROCCP2Q86T23 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.52
CROCCP2Q86T23 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC18.33■□□□□ 0.52
CROCCP2Q86T23 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CROCCP2Q86T23 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC18.33■□□□□ 0.52
CROCCP2Q86T23 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
CROCCP2Q86T23 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC18.33■□□□□ 0.52
CROCCP2Q86T23 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CROCCP2Q86T23 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CROCCP2Q86T23 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC18.33■□□□□ 0.52
CROCCP2Q86T23 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
CROCCP2Q86T23 HLA-J-201ENST00000462773 1622 ntBASIC18.33■□□□□ 0.52
CROCCP2Q86T23 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC18.33■□□□□ 0.52
CROCCP2Q86T23 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CROCCP2Q86T23 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
CROCCP2Q86T23 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CROCCP2Q86T23 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
CROCCP2Q86T23 CYP51A1P1-201ENST00000492267 1507 ntBASIC18.33■□□□□ 0.52
CROCCP2Q86T23 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CROCCP2Q86T23 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CROCCP2Q86T23 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
CROCCP2Q86T23 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC18.33■□□□□ 0.52
CROCCP2Q86T23 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC18.32■□□□□ 0.52
CROCCP2Q86T23 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CROCCP2Q86T23 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CROCCP2Q86T23 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC18.32■□□□□ 0.52
CROCCP2Q86T23 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC18.32■□□□□ 0.52
CROCCP2Q86T23 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CROCCP2Q86T23 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CROCCP2Q86T23 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC18.32■□□□□ 0.52
CROCCP2Q86T23 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
CROCCP2Q86T23 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CROCCP2Q86T23 NIFKP9-201ENST00000419265 221 ntBASIC18.32■□□□□ 0.52
CROCCP2Q86T23 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC18.32■□□□□ 0.52
CROCCP2Q86T23 CROCCP5-201ENST00000436658 830 ntBASIC18.32■□□□□ 0.52
CROCCP2Q86T23 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC18.32■□□□□ 0.52
CROCCP2Q86T23 AC009065.1-201ENST00000564055 1225 ntBASIC18.32■□□□□ 0.52
CROCCP2Q86T23 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC18.32■□□□□ 0.52
CROCCP2Q86T23 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC18.32■□□□□ 0.52
CROCCP2Q86T23 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC18.32■□□□□ 0.52
CROCCP2Q86T23 AC022517.1-201ENST00000592429 346 ntBASIC18.32■□□□□ 0.52
CROCCP2Q86T23 AC083880.1-201ENST00000608266 535 ntBASIC18.32■□□□□ 0.52
CROCCP2Q86T23 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC18.32■□□□□ 0.52
CROCCP2Q86T23 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CROCCP2Q86T23 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CROCCP2Q86T23 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CROCCP2Q86T23 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
CROCCP2Q86T23 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CROCCP2Q86T23 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC18.32■□□□□ 0.52
CROCCP2Q86T23 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC18.32■□□□□ 0.52
CROCCP2Q86T23 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
CROCCP2Q86T23 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CROCCP2Q86T23 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
CROCCP2Q86T23 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC18.31■□□□□ 0.52
CROCCP2Q86T23 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CROCCP2Q86T23 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC18.31■□□□□ 0.52
CROCCP2Q86T23 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC18.31■□□□□ 0.52
CROCCP2Q86T23 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC18.31■□□□□ 0.52
CROCCP2Q86T23 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CROCCP2Q86T23 PPP1R14BP5-201ENST00000440334 435 ntBASIC18.31■□□□□ 0.52
CROCCP2Q86T23 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC18.31■□□□□ 0.52
CROCCP2Q86T23 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC18.31■□□□□ 0.52
CROCCP2Q86T23 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC18.31■□□□□ 0.52
CROCCP2Q86T23 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC18.31■□□□□ 0.52
CROCCP2Q86T23 PFKL-212ENST00000628044 129 ntTSL 3 BASIC18.31■□□□□ 0.52
CROCCP2Q86T23 ASL-204ENST00000395331 1538 ntTSL 5 BASIC18.31■□□□□ 0.52
CROCCP2Q86T23 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CROCCP2Q86T23 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC18.31■□□□□ 0.52
CROCCP2Q86T23 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CROCCP2Q86T23 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC18.31■□□□□ 0.52
CROCCP2Q86T23 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CROCCP2Q86T23 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CROCCP2Q86T23 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
CROCCP2Q86T23 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CROCCP2Q86T23 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CROCCP2Q86T23 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC18.3■□□□□ 0.52
CROCCP2Q86T23 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CROCCP2Q86T23 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CROCCP2Q86T23 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CROCCP2Q86T23 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC18.3■□□□□ 0.52
CROCCP2Q86T23 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC18.3■□□□□ 0.52
CROCCP2Q86T23 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
CROCCP2Q86T23 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CROCCP2Q86T23 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC18.3■□□□□ 0.52
CROCCP2Q86T23 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
CROCCP2Q86T23 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC18.3■□□□□ 0.52
CROCCP2Q86T23 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC18.3■□□□□ 0.52
CROCCP2Q86T23 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC18.3■□□□□ 0.52
CROCCP2Q86T23 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CROCCP2Q86T23 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC18.3■□□□□ 0.52
CROCCP2Q86T23 LINC01451-201ENST00000623792 534 ntBASIC18.3■□□□□ 0.52
CROCCP2Q86T23 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
CROCCP2Q86T23 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms