Protein–RNA interactions for Protein: Q7LBR1

CHMP1B, Charged multivesicular body protein 1b, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1BQ7LBR1 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
CHMP1BQ7LBR1 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
CHMP1BQ7LBR1 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CHMP1BQ7LBR1 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC16.66■□□□□ 0.26
CHMP1BQ7LBR1 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC16.65■□□□□ 0.26
CHMP1BQ7LBR1 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC16.65■□□□□ 0.26
CHMP1BQ7LBR1 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CHMP1BQ7LBR1 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CHMP1BQ7LBR1 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CHMP1BQ7LBR1 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC16.65■□□□□ 0.26
CHMP1BQ7LBR1 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CHMP1BQ7LBR1 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CHMP1BQ7LBR1 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CHMP1BQ7LBR1 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
CHMP1BQ7LBR1 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
CHMP1BQ7LBR1 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC16.65■□□□□ 0.26
CHMP1BQ7LBR1 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
CHMP1BQ7LBR1 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CHMP1BQ7LBR1 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
CHMP1BQ7LBR1 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC16.65■□□□□ 0.26
CHMP1BQ7LBR1 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
CHMP1BQ7LBR1 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CHMP1BQ7LBR1 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC16.65■□□□□ 0.26
CHMP1BQ7LBR1 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
CHMP1BQ7LBR1 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC16.65■□□□□ 0.26
CHMP1BQ7LBR1 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC16.65■□□□□ 0.26
CHMP1BQ7LBR1 AC104390.1-201ENST00000555663 520 ntBASIC16.65■□□□□ 0.26
CHMP1BQ7LBR1 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC16.65■□□□□ 0.26
CHMP1BQ7LBR1 AC083906.6-201ENST00000641366 219 ntBASIC16.65■□□□□ 0.26
CHMP1BQ7LBR1 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
CHMP1BQ7LBR1 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CHMP1BQ7LBR1 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CHMP1BQ7LBR1 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CHMP1BQ7LBR1 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC16.65■□□□□ 0.26
CHMP1BQ7LBR1 AC139713.2-201ENST00000641328 2723 ntBASIC16.65■□□□□ 0.26
CHMP1BQ7LBR1 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
CHMP1BQ7LBR1 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CHMP1BQ7LBR1 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC16.65■□□□□ 0.26
CHMP1BQ7LBR1 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC16.65■□□□□ 0.26
CHMP1BQ7LBR1 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC16.65■□□□□ 0.26
CHMP1BQ7LBR1 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CHMP1BQ7LBR1 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CHMP1BQ7LBR1 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
CHMP1BQ7LBR1 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CHMP1BQ7LBR1 COMP-202ENST00000425807 2292 ntTSL 2 BASIC16.65■□□□□ 0.26
CHMP1BQ7LBR1 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
CHMP1BQ7LBR1 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.26
CHMP1BQ7LBR1 CROCCP3-202ENST00000420820 1947 ntBASIC16.64■□□□□ 0.26
CHMP1BQ7LBR1 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.26
CHMP1BQ7LBR1 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.26
CHMP1BQ7LBR1 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
CHMP1BQ7LBR1 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CHMP1BQ7LBR1 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
CHMP1BQ7LBR1 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CHMP1BQ7LBR1 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
CHMP1BQ7LBR1 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CHMP1BQ7LBR1 AC099398.1-201ENST00000567919 2776 ntBASIC16.64■□□□□ 0.25
CHMP1BQ7LBR1 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CHMP1BQ7LBR1 AL357033.4-201ENST00000617703 1807 ntBASIC16.64■□□□□ 0.25
CHMP1BQ7LBR1 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC16.64■□□□□ 0.25
CHMP1BQ7LBR1 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC16.64■□□□□ 0.25
CHMP1BQ7LBR1 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CHMP1BQ7LBR1 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CHMP1BQ7LBR1 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CHMP1BQ7LBR1 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC16.64■□□□□ 0.25
CHMP1BQ7LBR1 KRT18P38-201ENST00000449496 1282 ntBASIC16.64■□□□□ 0.25
CHMP1BQ7LBR1 SEC1P-202ENST00000473944 940 ntBASIC16.64■□□□□ 0.25
CHMP1BQ7LBR1 VENTXP5-201ENST00000523979 775 ntBASIC16.64■□□□□ 0.25
CHMP1BQ7LBR1 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC16.64■□□□□ 0.25
CHMP1BQ7LBR1 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC16.64■□□□□ 0.25
CHMP1BQ7LBR1 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CHMP1BQ7LBR1 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CHMP1BQ7LBR1 ZNF444P1-201ENST00000559497 298 ntBASIC16.64■□□□□ 0.25
CHMP1BQ7LBR1 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CHMP1BQ7LBR1 MYC-208ENST00000641036 567 ntBASIC16.64■□□□□ 0.25
CHMP1BQ7LBR1 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CHMP1BQ7LBR1 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC16.64■□□□□ 0.25
CHMP1BQ7LBR1 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CHMP1BQ7LBR1 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
CHMP1BQ7LBR1 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
CHMP1BQ7LBR1 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CHMP1BQ7LBR1 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC16.64■□□□□ 0.25
CHMP1BQ7LBR1 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC16.64■□□□□ 0.25
CHMP1BQ7LBR1 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
CHMP1BQ7LBR1 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CHMP1BQ7LBR1 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CHMP1BQ7LBR1 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CHMP1BQ7LBR1 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
CHMP1BQ7LBR1 Z98044.1-201ENST00000632503 1764 ntBASIC16.64■□□□□ 0.25
CHMP1BQ7LBR1 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CHMP1BQ7LBR1 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
CHMP1BQ7LBR1 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CHMP1BQ7LBR1 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
CHMP1BQ7LBR1 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CHMP1BQ7LBR1 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
CHMP1BQ7LBR1 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CHMP1BQ7LBR1 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
CHMP1BQ7LBR1 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CHMP1BQ7LBR1 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
CHMP1BQ7LBR1 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 57.2 ms