Protein–RNA interactions for Protein: Q6ZR62

RTL4, Retrotransposon Gag-like protein 4, humanhuman

Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL4Q6ZR62 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RTL4Q6ZR62 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC16.93■□□□□ 0.3
RTL4Q6ZR62 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC16.93■□□□□ 0.3
RTL4Q6ZR62 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RTL4Q6ZR62 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
RTL4Q6ZR62 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RTL4Q6ZR62 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
RTL4Q6ZR62 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC16.93■□□□□ 0.3
RTL4Q6ZR62 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RTL4Q6ZR62 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RTL4Q6ZR62 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RTL4Q6ZR62 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RTL4Q6ZR62 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC16.93■□□□□ 0.3
RTL4Q6ZR62 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC16.93■□□□□ 0.3
RTL4Q6ZR62 PBK-203ENST00000522944 1499 ntTSL 2 BASIC16.93■□□□□ 0.3
RTL4Q6ZR62 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RTL4Q6ZR62 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
RTL4Q6ZR62 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RTL4Q6ZR62 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC16.92■□□□□ 0.3
RTL4Q6ZR62 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
RTL4Q6ZR62 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RTL4Q6ZR62 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RTL4Q6ZR62 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC16.92■□□□□ 0.3
RTL4Q6ZR62 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC16.92■□□□□ 0.3
RTL4Q6ZR62 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RTL4Q6ZR62 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC16.92■□□□□ 0.3
RTL4Q6ZR62 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC16.92■□□□□ 0.3
RTL4Q6ZR62 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RTL4Q6ZR62 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RTL4Q6ZR62 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC16.92■□□□□ 0.3
RTL4Q6ZR62 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RTL4Q6ZR62 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RTL4Q6ZR62 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC16.92■□□□□ 0.3
RTL4Q6ZR62 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC16.92■□□□□ 0.3
RTL4Q6ZR62 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC16.92■□□□□ 0.3
RTL4Q6ZR62 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RTL4Q6ZR62 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
RTL4Q6ZR62 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC16.92■□□□□ 0.3
RTL4Q6ZR62 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC16.92■□□□□ 0.3
RTL4Q6ZR62 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
RTL4Q6ZR62 AC112777.1-201ENST00000540175 1423 ntBASIC16.92■□□□□ 0.3
RTL4Q6ZR62 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RTL4Q6ZR62 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
RTL4Q6ZR62 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
RTL4Q6ZR62 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RTL4Q6ZR62 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RTL4Q6ZR62 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
RTL4Q6ZR62 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RTL4Q6ZR62 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC16.92■□□□□ 0.3
RTL4Q6ZR62 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC16.92■□□□□ 0.3
RTL4Q6ZR62 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
RTL4Q6ZR62 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC16.92■□□□□ 0.3
RTL4Q6ZR62 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
RTL4Q6ZR62 AC018470.1-201ENST00000624790 3129 ntBASIC16.92■□□□□ 0.3
RTL4Q6ZR62 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
RTL4Q6ZR62 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
RTL4Q6ZR62 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
RTL4Q6ZR62 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RTL4Q6ZR62 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RTL4Q6ZR62 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC16.91■□□□□ 0.3
RTL4Q6ZR62 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC16.91■□□□□ 0.3
RTL4Q6ZR62 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC16.91■□□□□ 0.3
RTL4Q6ZR62 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
RTL4Q6ZR62 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RTL4Q6ZR62 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RTL4Q6ZR62 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
RTL4Q6ZR62 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC16.91■□□□□ 0.3
RTL4Q6ZR62 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC16.91■□□□□ 0.3
RTL4Q6ZR62 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC16.91■□□□□ 0.3
RTL4Q6ZR62 AC069148.1-201ENST00000608741 768 ntBASIC16.91■□□□□ 0.3
RTL4Q6ZR62 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
RTL4Q6ZR62 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC16.91■□□□□ 0.3
RTL4Q6ZR62 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RTL4Q6ZR62 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RTL4Q6ZR62 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC16.91■□□□□ 0.3
RTL4Q6ZR62 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RTL4Q6ZR62 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RTL4Q6ZR62 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC16.91■□□□□ 0.3
RTL4Q6ZR62 AL163051.1-201ENST00000569214 1512 ntBASIC16.91■□□□□ 0.3
RTL4Q6ZR62 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC16.91■□□□□ 0.3
RTL4Q6ZR62 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
RTL4Q6ZR62 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
RTL4Q6ZR62 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RTL4Q6ZR62 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RTL4Q6ZR62 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
RTL4Q6ZR62 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RTL4Q6ZR62 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RTL4Q6ZR62 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RTL4Q6ZR62 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RTL4Q6ZR62 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RTL4Q6ZR62 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RTL4Q6ZR62 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RTL4Q6ZR62 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RTL4Q6ZR62 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC16.9■□□□□ 0.3
RTL4Q6ZR62 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
RTL4Q6ZR62 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RTL4Q6ZR62 MIR662-201ENST00000384847 95 ntBASIC16.9■□□□□ 0.3
RTL4Q6ZR62 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
RTL4Q6ZR62 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RTL4Q6ZR62 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 65.3 ms