Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
RSPO4Q2I0M5 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC17.4■□□□□ 0.38
RSPO4Q2I0M5 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC17.4■□□□□ 0.38
RSPO4Q2I0M5 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
RSPO4Q2I0M5 AC125437.2-201ENST00000625180 2167 ntBASIC17.4■□□□□ 0.38
RSPO4Q2I0M5 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RSPO4Q2I0M5 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RSPO4Q2I0M5 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RSPO4Q2I0M5 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RSPO4Q2I0M5 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
RSPO4Q2I0M5 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RSPO4Q2I0M5 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC17.39■□□□□ 0.38
RSPO4Q2I0M5 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
RSPO4Q2I0M5 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
RSPO4Q2I0M5 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RSPO4Q2I0M5 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RSPO4Q2I0M5 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC17.39■□□□□ 0.37
RSPO4Q2I0M5 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RSPO4Q2I0M5 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC17.39■□□□□ 0.37
RSPO4Q2I0M5 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RSPO4Q2I0M5 NARF-204ENST00000390006 1766 ntTSL 2 BASIC17.39■□□□□ 0.37
RSPO4Q2I0M5 CBR1-202ENST00000399191 838 ntTSL 3 BASIC17.39■□□□□ 0.37
RSPO4Q2I0M5 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
RSPO4Q2I0M5 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC17.39■□□□□ 0.37
RSPO4Q2I0M5 TSPY16P-201ENST00000449843 468 ntBASIC17.39■□□□□ 0.37
RSPO4Q2I0M5 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RSPO4Q2I0M5 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC17.39■□□□□ 0.37
RSPO4Q2I0M5 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC17.39■□□□□ 0.37
RSPO4Q2I0M5 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC17.39■□□□□ 0.37
RSPO4Q2I0M5 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC17.39■□□□□ 0.37
RSPO4Q2I0M5 RN7SL204P-201ENST00000582831 262 ntBASIC17.39■□□□□ 0.37
RSPO4Q2I0M5 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RSPO4Q2I0M5 YTHDF3-AS1-201ENST00000603538 718 ntBASIC17.39■□□□□ 0.37
RSPO4Q2I0M5 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC17.39■□□□□ 0.37
RSPO4Q2I0M5 AC004877.2-201ENST00000623941 599 ntBASIC17.39■□□□□ 0.37
RSPO4Q2I0M5 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC17.39■□□□□ 0.37
RSPO4Q2I0M5 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RSPO4Q2I0M5 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
RSPO4Q2I0M5 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RSPO4Q2I0M5 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
RSPO4Q2I0M5 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
RSPO4Q2I0M5 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RSPO4Q2I0M5 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RSPO4Q2I0M5 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
RSPO4Q2I0M5 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RSPO4Q2I0M5 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
RSPO4Q2I0M5 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RSPO4Q2I0M5 Z98044.1-201ENST00000632503 1764 ntBASIC17.38■□□□□ 0.37
RSPO4Q2I0M5 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RSPO4Q2I0M5 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RSPO4Q2I0M5 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC17.38■□□□□ 0.37
RSPO4Q2I0M5 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RSPO4Q2I0M5 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RSPO4Q2I0M5 NEK7-201ENST00000367383 586 ntTSL 2 BASIC17.38■□□□□ 0.37
RSPO4Q2I0M5 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC17.38■□□□□ 0.37
RSPO4Q2I0M5 BAD-202ENST00000394531 631 ntTSL 3 BASIC17.38■□□□□ 0.37
RSPO4Q2I0M5 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC17.38■□□□□ 0.37
RSPO4Q2I0M5 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC17.38■□□□□ 0.37
RSPO4Q2I0M5 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC17.38■□□□□ 0.37
RSPO4Q2I0M5 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC17.38■□□□□ 0.37
RSPO4Q2I0M5 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RSPO4Q2I0M5 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RSPO4Q2I0M5 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC17.38■□□□□ 0.37
RSPO4Q2I0M5 CITED2-204ENST00000618718 901 ntTSL 2 BASIC17.38■□□□□ 0.37
RSPO4Q2I0M5 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC17.38■□□□□ 0.37
RSPO4Q2I0M5 AC105339.1-204ENST00000636249 355 ntBASIC17.38■□□□□ 0.37
RSPO4Q2I0M5 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC17.38■□□□□ 0.37
RSPO4Q2I0M5 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC17.38■□□□□ 0.37
RSPO4Q2I0M5 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
RSPO4Q2I0M5 BCAR1-209ENST00000546196 1340 ntBASIC17.38■□□□□ 0.37
RSPO4Q2I0M5 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RSPO4Q2I0M5 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC17.38■□□□□ 0.37
RSPO4Q2I0M5 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
RSPO4Q2I0M5 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RSPO4Q2I0M5 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
RSPO4Q2I0M5 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RSPO4Q2I0M5 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC17.38■□□□□ 0.37
RSPO4Q2I0M5 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RSPO4Q2I0M5 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
RSPO4Q2I0M5 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC17.37■□□□□ 0.37
RSPO4Q2I0M5 Z82202.1-201ENST00000623446 1880 ntBASIC17.37■□□□□ 0.37
RSPO4Q2I0M5 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
RSPO4Q2I0M5 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC17.37■□□□□ 0.37
RSPO4Q2I0M5 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RSPO4Q2I0M5 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RSPO4Q2I0M5 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RSPO4Q2I0M5 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
RSPO4Q2I0M5 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RSPO4Q2I0M5 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
RSPO4Q2I0M5 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
RSPO4Q2I0M5 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RSPO4Q2I0M5 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
RSPO4Q2I0M5 HNRNPFP1-201ENST00000391730 1133 ntBASIC17.37■□□□□ 0.37
RSPO4Q2I0M5 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
RSPO4Q2I0M5 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC17.37■□□□□ 0.37
RSPO4Q2I0M5 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC17.37■□□□□ 0.37
RSPO4Q2I0M5 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RSPO4Q2I0M5 TFAMP1-201ENST00000412727 736 ntBASIC17.37■□□□□ 0.37
RSPO4Q2I0M5 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC17.37■□□□□ 0.37
RSPO4Q2I0M5 AC023141.5-201ENST00000458585 616 ntBASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms