Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
PCDH1Q08174 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
PCDH1Q08174 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
PCDH1Q08174 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PCDH1Q08174 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PCDH1Q08174 MIR662-201ENST00000384847 95 ntBASIC17.41■□□□□ 0.38
PCDH1Q08174 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PCDH1Q08174 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC17.41■□□□□ 0.38
PCDH1Q08174 LTBR-211ENST00000543190 785 ntTSL 3 BASIC17.41■□□□□ 0.38
PCDH1Q08174 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC17.41■□□□□ 0.38
PCDH1Q08174 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC17.41■□□□□ 0.38
PCDH1Q08174 AC006011.2-201ENST00000621313 1158 ntBASIC17.41■□□□□ 0.38
PCDH1Q08174 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
PCDH1Q08174 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC17.41■□□□□ 0.38
PCDH1Q08174 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PCDH1Q08174 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PCDH1Q08174 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
PCDH1Q08174 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
PCDH1Q08174 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PCDH1Q08174 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
PCDH1Q08174 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PCDH1Q08174 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC17.41■□□□□ 0.38
PCDH1Q08174 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PCDH1Q08174 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
PCDH1Q08174 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PCDH1Q08174 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
PCDH1Q08174 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC17.41■□□□□ 0.38
PCDH1Q08174 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC17.41■□□□□ 0.38
PCDH1Q08174 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC17.4■□□□□ 0.38
PCDH1Q08174 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCDH1Q08174 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PCDH1Q08174 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCDH1Q08174 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
PCDH1Q08174 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCDH1Q08174 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCDH1Q08174 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
PCDH1Q08174 KRT18P65-201ENST00000439811 1286 ntBASIC17.4■□□□□ 0.38
PCDH1Q08174 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PCDH1Q08174 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PCDH1Q08174 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC17.4■□□□□ 0.38
PCDH1Q08174 PPOX-219ENST00000544598 813 ntTSL 2 BASIC17.4■□□□□ 0.38
PCDH1Q08174 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC17.4■□□□□ 0.38
PCDH1Q08174 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCDH1Q08174 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCDH1Q08174 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC17.4■□□□□ 0.38
PCDH1Q08174 HYMAI.1-201ENST00000620949 238 ntBASIC17.4■□□□□ 0.38
PCDH1Q08174 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
PCDH1Q08174 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
PCDH1Q08174 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCDH1Q08174 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC17.4■□□□□ 0.38
PCDH1Q08174 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCDH1Q08174 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCDH1Q08174 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCDH1Q08174 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
PCDH1Q08174 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC17.4■□□□□ 0.38
PCDH1Q08174 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
PCDH1Q08174 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
PCDH1Q08174 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
PCDH1Q08174 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC17.39■□□□□ 0.38
PCDH1Q08174 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
PCDH1Q08174 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC17.39■□□□□ 0.37
PCDH1Q08174 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC17.39■□□□□ 0.37
PCDH1Q08174 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC17.39■□□□□ 0.37
PCDH1Q08174 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC17.39■□□□□ 0.37
PCDH1Q08174 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PCDH1Q08174 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
PCDH1Q08174 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PCDH1Q08174 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC17.39■□□□□ 0.37
PCDH1Q08174 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC17.39■□□□□ 0.37
PCDH1Q08174 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PCDH1Q08174 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
PCDH1Q08174 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
PCDH1Q08174 FAM8A6P-201ENST00000407496 1135 ntBASIC17.39■□□□□ 0.37
PCDH1Q08174 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
PCDH1Q08174 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
PCDH1Q08174 RBM42-202ENST00000586618 771 ntTSL 3 BASIC17.39■□□□□ 0.37
PCDH1Q08174 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC17.39■□□□□ 0.37
PCDH1Q08174 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
PCDH1Q08174 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
PCDH1Q08174 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
PCDH1Q08174 CD276-203ENST00000537340 2439 ntTSL 2 BASIC17.39■□□□□ 0.37
PCDH1Q08174 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC17.39■□□□□ 0.37
PCDH1Q08174 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
PCDH1Q08174 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PCDH1Q08174 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PCDH1Q08174 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PCDH1Q08174 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC17.38■□□□□ 0.37
PCDH1Q08174 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PCDH1Q08174 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
PCDH1Q08174 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC17.38■□□□□ 0.37
PCDH1Q08174 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
PCDH1Q08174 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PCDH1Q08174 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PCDH1Q08174 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PCDH1Q08174 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
PCDH1Q08174 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PCDH1Q08174 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PCDH1Q08174 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC17.38■□□□□ 0.37
PCDH1Q08174 HBZP1-201ENST00000354915 429 ntBASIC17.38■□□□□ 0.37
PCDH1Q08174 LY6E-213ENST00000522528 606 ntTSL 3 BASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 55.3 ms