Protein–RNA interactions for Protein: P78413

IRX4, Iroquois-class homeodomain protein IRX-4, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX4P78413 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
IRX4P78413 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
IRX4P78413 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
IRX4P78413 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
IRX4P78413 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC18.78■□□□□ 0.6
IRX4P78413 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
IRX4P78413 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
IRX4P78413 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
IRX4P78413 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
IRX4P78413 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
IRX4P78413 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
IRX4P78413 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
IRX4P78413 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
IRX4P78413 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
IRX4P78413 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
IRX4P78413 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
IRX4P78413 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
IRX4P78413 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
IRX4P78413 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC18.77■□□□□ 0.6
IRX4P78413 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC18.77■□□□□ 0.6
IRX4P78413 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC18.77■□□□□ 0.6
IRX4P78413 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC18.77■□□□□ 0.6
IRX4P78413 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC18.77■□□□□ 0.6
IRX4P78413 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
IRX4P78413 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
IRX4P78413 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
IRX4P78413 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
IRX4P78413 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
IRX4P78413 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.59
IRX4P78413 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
IRX4P78413 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
IRX4P78413 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
IRX4P78413 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC18.76■□□□□ 0.59
IRX4P78413 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
IRX4P78413 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
IRX4P78413 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
IRX4P78413 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC18.76■□□□□ 0.59
IRX4P78413 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
IRX4P78413 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
IRX4P78413 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
IRX4P78413 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
IRX4P78413 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
IRX4P78413 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
IRX4P78413 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
IRX4P78413 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
IRX4P78413 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
IRX4P78413 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC18.76■□□□□ 0.59
IRX4P78413 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
IRX4P78413 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC18.76■□□□□ 0.59
IRX4P78413 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC18.76■□□□□ 0.59
IRX4P78413 AP002383.4-201ENST00000442518 975 ntBASIC18.76■□□□□ 0.59
IRX4P78413 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
IRX4P78413 AC034232.1-201ENST00000506026 1064 ntBASIC18.76■□□□□ 0.59
IRX4P78413 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
IRX4P78413 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
IRX4P78413 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
IRX4P78413 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC18.76■□□□□ 0.59
IRX4P78413 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
IRX4P78413 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC18.76■□□□□ 0.59
IRX4P78413 GAS2L1P1-201ENST00000420145 1480 ntBASIC18.76■□□□□ 0.59
IRX4P78413 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC18.76■□□□□ 0.59
IRX4P78413 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
IRX4P78413 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
IRX4P78413 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
IRX4P78413 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
IRX4P78413 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC18.76■□□□□ 0.59
IRX4P78413 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC18.76■□□□□ 0.59
IRX4P78413 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
IRX4P78413 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
IRX4P78413 SNAI3-AS1-205ENST00000568633 2096 ntBASIC18.75■□□□□ 0.59
IRX4P78413 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
IRX4P78413 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
IRX4P78413 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
IRX4P78413 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
IRX4P78413 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
IRX4P78413 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
IRX4P78413 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
IRX4P78413 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC18.75■□□□□ 0.59
IRX4P78413 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
IRX4P78413 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
IRX4P78413 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
IRX4P78413 ILF2-202ENST00000368681 726 ntTSL 2 BASIC18.75■□□□□ 0.59
IRX4P78413 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
IRX4P78413 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
IRX4P78413 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC18.75■□□□□ 0.59
IRX4P78413 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC18.75■□□□□ 0.59
IRX4P78413 TBCB-205ENST00000585746 875 ntTSL 3 BASIC18.75■□□□□ 0.59
IRX4P78413 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
IRX4P78413 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
IRX4P78413 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
IRX4P78413 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC18.75■□□□□ 0.59
IRX4P78413 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
IRX4P78413 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
IRX4P78413 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
IRX4P78413 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC18.75■□□□□ 0.59
IRX4P78413 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
IRX4P78413 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC18.75■□□□□ 0.59
IRX4P78413 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
IRX4P78413 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
IRX4P78413 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC18.75■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms