Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 AC092597.1-201ENST00000487352 616 ntBASIC15.77■□□□□ 0.12
HIST1H3AP68431 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
HIST1H3AP68431 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC15.77■□□□□ 0.12
HIST1H3AP68431 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
HIST1H3AP68431 RBM42-202ENST00000586618 771 ntTSL 3 BASIC15.77■□□□□ 0.12
HIST1H3AP68431 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
HIST1H3AP68431 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
HIST1H3AP68431 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC15.77■□□□□ 0.11
HIST1H3AP68431 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.11
HIST1H3AP68431 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
HIST1H3AP68431 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
HIST1H3AP68431 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
HIST1H3AP68431 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
HIST1H3AP68431 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
HIST1H3AP68431 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC15.77■□□□□ 0.11
HIST1H3AP68431 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC15.77■□□□□ 0.11
HIST1H3AP68431 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
HIST1H3AP68431 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
HIST1H3AP68431 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
HIST1H3AP68431 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC15.76■□□□□ 0.11
HIST1H3AP68431 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
HIST1H3AP68431 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
HIST1H3AP68431 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC15.76■□□□□ 0.11
HIST1H3AP68431 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
HIST1H3AP68431 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
HIST1H3AP68431 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
HIST1H3AP68431 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
HIST1H3AP68431 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
HIST1H3AP68431 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC15.76■□□□□ 0.11
HIST1H3AP68431 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
HIST1H3AP68431 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
HIST1H3AP68431 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
HIST1H3AP68431 MIR662-201ENST00000384847 95 ntBASIC15.76■□□□□ 0.11
HIST1H3AP68431 FAM8A6P-201ENST00000407496 1135 ntBASIC15.76■□□□□ 0.11
HIST1H3AP68431 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
HIST1H3AP68431 AK4P3-201ENST00000418260 669 ntBASIC15.76■□□□□ 0.11
HIST1H3AP68431 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
HIST1H3AP68431 KRT18P65-201ENST00000439811 1286 ntBASIC15.76■□□□□ 0.11
HIST1H3AP68431 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC15.76■□□□□ 0.11
HIST1H3AP68431 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC15.76■□□□□ 0.11
HIST1H3AP68431 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
HIST1H3AP68431 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
HIST1H3AP68431 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC15.76■□□□□ 0.11
HIST1H3AP68431 LITAF-220ENST00000620789 692 ntTSL 5 BASIC15.76■□□□□ 0.11
HIST1H3AP68431 HYMAI.1-201ENST00000620949 238 ntBASIC15.76■□□□□ 0.11
HIST1H3AP68431 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
HIST1H3AP68431 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC15.76■□□□□ 0.11
HIST1H3AP68431 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC15.76■□□□□ 0.11
HIST1H3AP68431 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
HIST1H3AP68431 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC15.76■□□□□ 0.11
HIST1H3AP68431 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC15.76■□□□□ 0.11
HIST1H3AP68431 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
HIST1H3AP68431 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
HIST1H3AP68431 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
HIST1H3AP68431 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC15.76■□□□□ 0.11
HIST1H3AP68431 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
HIST1H3AP68431 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
HIST1H3AP68431 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
HIST1H3AP68431 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC15.75■□□□□ 0.11
HIST1H3AP68431 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC15.75■□□□□ 0.11
HIST1H3AP68431 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
HIST1H3AP68431 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC15.75■□□□□ 0.11
HIST1H3AP68431 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
HIST1H3AP68431 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
HIST1H3AP68431 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
HIST1H3AP68431 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
HIST1H3AP68431 PCDHB18P-201ENST00000524813 2368 ntBASIC15.75■□□□□ 0.11
HIST1H3AP68431 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
HIST1H3AP68431 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
HIST1H3AP68431 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
HIST1H3AP68431 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
HIST1H3AP68431 HBZP1-201ENST00000354915 429 ntBASIC15.75■□□□□ 0.11
HIST1H3AP68431 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
HIST1H3AP68431 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
HIST1H3AP68431 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
HIST1H3AP68431 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
HIST1H3AP68431 KRT18P48-201ENST00000434763 852 ntBASIC15.75■□□□□ 0.11
HIST1H3AP68431 AC104076.2-201ENST00000448912 469 ntBASIC15.75■□□□□ 0.11
HIST1H3AP68431 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC15.75■□□□□ 0.11
HIST1H3AP68431 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC15.75■□□□□ 0.11
HIST1H3AP68431 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC15.75■□□□□ 0.11
HIST1H3AP68431 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC15.75■□□□□ 0.11
HIST1H3AP68431 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
HIST1H3AP68431 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
HIST1H3AP68431 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
HIST1H3AP68431 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
HIST1H3AP68431 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
HIST1H3AP68431 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
HIST1H3AP68431 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC15.75■□□□□ 0.11
HIST1H3AP68431 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
HIST1H3AP68431 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
HIST1H3AP68431 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
HIST1H3AP68431 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
HIST1H3AP68431 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
HIST1H3AP68431 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
HIST1H3AP68431 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC15.75■□□□□ 0.11
HIST1H3AP68431 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC15.74■□□□□ 0.11
HIST1H3AP68431 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC15.74■□□□□ 0.11
HIST1H3AP68431 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC15.74■□□□□ 0.11
HIST1H3AP68431 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms