Protein–RNA interactions for Protein: P62304

SNRPE, Small nuclear ribonucleoprotein E, humanhuman

Known RBP Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPEP62304 AL355312.1-201ENST00000407115 2176 ntBASIC13.85□□□□□ -0.19
SNRPEP62304 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SNRPEP62304 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC13.85□□□□□ -0.19
SNRPEP62304 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SNRPEP62304 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC13.85□□□□□ -0.19
SNRPEP62304 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC13.84□□□□□ -0.19
SNRPEP62304 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SNRPEP62304 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SNRPEP62304 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC13.84□□□□□ -0.19
SNRPEP62304 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SNRPEP62304 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
SNRPEP62304 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
SNRPEP62304 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC13.84□□□□□ -0.19
SNRPEP62304 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
SNRPEP62304 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SNRPEP62304 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SNRPEP62304 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
SNRPEP62304 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
SNRPEP62304 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
SNRPEP62304 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SNRPEP62304 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
SNRPEP62304 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
SNRPEP62304 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SNRPEP62304 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SNRPEP62304 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC13.84□□□□□ -0.19
SNRPEP62304 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SNRPEP62304 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SNRPEP62304 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
SNRPEP62304 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC13.84□□□□□ -0.19
SNRPEP62304 CLTA-210ENST00000540080 989 ntTSL 2 BASIC13.84□□□□□ -0.19
SNRPEP62304 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
SNRPEP62304 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
SNRPEP62304 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SNRPEP62304 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SNRPEP62304 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SNRPEP62304 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SNRPEP62304 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
SNRPEP62304 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC13.84□□□□□ -0.19
SNRPEP62304 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
SNRPEP62304 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
SNRPEP62304 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC13.84□□□□□ -0.19
SNRPEP62304 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC13.84□□□□□ -0.19
SNRPEP62304 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
SNRPEP62304 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
SNRPEP62304 AL365203.3-201ENST00000609742 2057 ntBASIC13.84□□□□□ -0.19
SNRPEP62304 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
SNRPEP62304 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC13.84□□□□□ -0.19
SNRPEP62304 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
SNRPEP62304 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
SNRPEP62304 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC13.84□□□□□ -0.19
SNRPEP62304 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SNRPEP62304 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
SNRPEP62304 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SNRPEP62304 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.19
SNRPEP62304 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
SNRPEP62304 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
SNRPEP62304 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
SNRPEP62304 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.19
SNRPEP62304 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
SNRPEP62304 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
SNRPEP62304 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC13.83□□□□□ -0.19
SNRPEP62304 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
SNRPEP62304 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SNRPEP62304 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
SNRPEP62304 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SNRPEP62304 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
SNRPEP62304 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
SNRPEP62304 VILL-207ENST00000465644 1857 ntTSL 5 BASIC13.83□□□□□ -0.2
SNRPEP62304 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
SNRPEP62304 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC13.83□□□□□ -0.2
SNRPEP62304 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SNRPEP62304 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SNRPEP62304 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
SNRPEP62304 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
SNRPEP62304 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
SNRPEP62304 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC13.83□□□□□ -0.2
SNRPEP62304 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC13.83□□□□□ -0.2
SNRPEP62304 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SNRPEP62304 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
SNRPEP62304 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SNRPEP62304 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
SNRPEP62304 GOLGA6L5P-202ENST00000515341 1828 ntBASIC13.83□□□□□ -0.2
SNRPEP62304 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SNRPEP62304 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC13.83□□□□□ -0.2
SNRPEP62304 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SNRPEP62304 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
SNRPEP62304 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SNRPEP62304 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SNRPEP62304 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SNRPEP62304 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC13.82□□□□□ -0.2
SNRPEP62304 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SNRPEP62304 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SNRPEP62304 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
SNRPEP62304 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SNRPEP62304 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
SNRPEP62304 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
SNRPEP62304 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC13.82□□□□□ -0.2
SNRPEP62304 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SNRPEP62304 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SNRPEP62304 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms