Protein–RNA interactions for Protein: P42773

CDKN2C, Cyclin-dependent kinase 4 inhibitor C, humanhuman

Predictions only

Length 168 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2CP42773 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CDKN2CP42773 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CDKN2CP42773 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CDKN2CP42773 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CDKN2CP42773 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CDKN2CP42773 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CDKN2CP42773 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CDKN2CP42773 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
CDKN2CP42773 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CDKN2CP42773 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CDKN2CP42773 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CDKN2CP42773 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CDKN2CP42773 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CDKN2CP42773 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CDKN2CP42773 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC17.06■□□□□ 0.32
CDKN2CP42773 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC17.06■□□□□ 0.32
CDKN2CP42773 EGLN1P1-201ENST00000531623 762 ntBASIC17.06■□□□□ 0.32
CDKN2CP42773 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
CDKN2CP42773 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC17.06■□□□□ 0.32
CDKN2CP42773 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CDKN2CP42773 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
CDKN2CP42773 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC17.06■□□□□ 0.32
CDKN2CP42773 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CDKN2CP42773 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CDKN2CP42773 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CDKN2CP42773 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC17.06■□□□□ 0.32
CDKN2CP42773 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CDKN2CP42773 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC17.06■□□□□ 0.32
CDKN2CP42773 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CDKN2CP42773 HTR7P1-202ENST00000624664 4411 ntBASIC17.06■□□□□ 0.32
CDKN2CP42773 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CDKN2CP42773 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CDKN2CP42773 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CDKN2CP42773 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CDKN2CP42773 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CDKN2CP42773 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC17.06■□□□□ 0.32
CDKN2CP42773 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CDKN2CP42773 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
CDKN2CP42773 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
CDKN2CP42773 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
CDKN2CP42773 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CDKN2CP42773 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC17.05■□□□□ 0.32
CDKN2CP42773 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CDKN2CP42773 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CDKN2CP42773 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CDKN2CP42773 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CDKN2CP42773 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC17.05■□□□□ 0.32
CDKN2CP42773 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CDKN2CP42773 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CDKN2CP42773 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC17.05■□□□□ 0.32
CDKN2CP42773 DUTP2-201ENST00000519164 463 ntBASIC17.05■□□□□ 0.32
CDKN2CP42773 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC17.05■□□□□ 0.32
CDKN2CP42773 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC17.05■□□□□ 0.32
CDKN2CP42773 REEP1-209ENST00000541910 969 ntTSL 2 BASIC17.05■□□□□ 0.32
CDKN2CP42773 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC17.05■□□□□ 0.32
CDKN2CP42773 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
CDKN2CP42773 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CDKN2CP42773 AC010947.1-201ENST00000623454 693 ntBASIC17.05■□□□□ 0.32
CDKN2CP42773 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CDKN2CP42773 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
CDKN2CP42773 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC17.05■□□□□ 0.32
CDKN2CP42773 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
CDKN2CP42773 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CDKN2CP42773 SIRPAP1-201ENST00000448467 1770 ntBASIC17.05■□□□□ 0.32
CDKN2CP42773 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC17.05■□□□□ 0.32
CDKN2CP42773 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CDKN2CP42773 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
CDKN2CP42773 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CDKN2CP42773 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CDKN2CP42773 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CDKN2CP42773 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
CDKN2CP42773 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC17.04■□□□□ 0.32
CDKN2CP42773 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC17.04■□□□□ 0.32
CDKN2CP42773 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CDKN2CP42773 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC17.04■□□□□ 0.32
CDKN2CP42773 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
CDKN2CP42773 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CDKN2CP42773 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CDKN2CP42773 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
CDKN2CP42773 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CDKN2CP42773 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC17.04■□□□□ 0.32
CDKN2CP42773 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
CDKN2CP42773 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC17.04■□□□□ 0.32
CDKN2CP42773 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CDKN2CP42773 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CDKN2CP42773 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
CDKN2CP42773 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CDKN2CP42773 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CDKN2CP42773 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CDKN2CP42773 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
CDKN2CP42773 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC17.04■□□□□ 0.32
CDKN2CP42773 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
CDKN2CP42773 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
CDKN2CP42773 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CDKN2CP42773 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC17.04■□□□□ 0.32
CDKN2CP42773 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CDKN2CP42773 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC17.04■□□□□ 0.32
CDKN2CP42773 GLDC-219ENST00000640208 420 ntTSL 2 BASIC17.04■□□□□ 0.32
CDKN2CP42773 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CDKN2CP42773 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms