Protein–RNA interactions for Protein: P28566

HTR1E, 5-hydroxytryptamine receptor 1E, humanhuman

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR1EP28566 CYGB-204ENST00000589342 815 ntTSL 3 BASIC17.3■□□□□ 0.36
HTR1EP28566 AC139887.4-201ENST00000607877 719 ntBASIC17.3■□□□□ 0.36
HTR1EP28566 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC17.3■□□□□ 0.36
HTR1EP28566 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HTR1EP28566 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC17.3■□□□□ 0.36
HTR1EP28566 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HTR1EP28566 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HTR1EP28566 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
HTR1EP28566 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HTR1EP28566 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC17.3■□□□□ 0.36
HTR1EP28566 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HTR1EP28566 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HTR1EP28566 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
HTR1EP28566 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
HTR1EP28566 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
HTR1EP28566 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
HTR1EP28566 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC17.29■□□□□ 0.36
HTR1EP28566 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
HTR1EP28566 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC17.29■□□□□ 0.36
HTR1EP28566 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
HTR1EP28566 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HTR1EP28566 AC080080.1-201ENST00000625121 2420 ntBASIC17.29■□□□□ 0.36
HTR1EP28566 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
HTR1EP28566 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HTR1EP28566 AC141586.5-201ENST00000624546 2050 ntBASIC17.29■□□□□ 0.36
HTR1EP28566 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC17.29■□□□□ 0.36
HTR1EP28566 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
HTR1EP28566 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HTR1EP28566 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC17.29■□□□□ 0.36
HTR1EP28566 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HTR1EP28566 AL031133.1-201ENST00000406807 723 ntBASIC17.29■□□□□ 0.36
HTR1EP28566 AC004951.3-201ENST00000418645 1148 ntBASIC17.29■□□□□ 0.36
HTR1EP28566 AC092647.4-201ENST00000457211 535 ntBASIC17.29■□□□□ 0.36
HTR1EP28566 GPX4-207ENST00000589115 812 ntTSL 2 BASIC17.29■□□□□ 0.36
HTR1EP28566 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC17.29■□□□□ 0.36
HTR1EP28566 DBP-204ENST00000599385 709 ntTSL 3 BASIC17.29■□□□□ 0.36
HTR1EP28566 AP000550.4-202ENST00000639755 178 ntBASIC17.29■□□□□ 0.36
HTR1EP28566 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HTR1EP28566 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
HTR1EP28566 KRT18P55-202ENST00000578578 1546 ntBASIC17.29■□□□□ 0.36
HTR1EP28566 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
HTR1EP28566 AC099398.1-201ENST00000567919 2776 ntBASIC17.29■□□□□ 0.36
HTR1EP28566 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
HTR1EP28566 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HTR1EP28566 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HTR1EP28566 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
HTR1EP28566 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
HTR1EP28566 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC17.29■□□□□ 0.36
HTR1EP28566 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
HTR1EP28566 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
HTR1EP28566 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
HTR1EP28566 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC17.29■□□□□ 0.36
HTR1EP28566 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
HTR1EP28566 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HTR1EP28566 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HTR1EP28566 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
HTR1EP28566 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC17.28■□□□□ 0.36
HTR1EP28566 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
HTR1EP28566 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC17.28■□□□□ 0.36
HTR1EP28566 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
HTR1EP28566 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HTR1EP28566 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
HTR1EP28566 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HTR1EP28566 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC17.28■□□□□ 0.36
HTR1EP28566 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC17.28■□□□□ 0.36
HTR1EP28566 KRT18P48-201ENST00000434763 852 ntBASIC17.28■□□□□ 0.36
HTR1EP28566 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
HTR1EP28566 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
HTR1EP28566 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC17.28■□□□□ 0.36
HTR1EP28566 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
HTR1EP28566 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
HTR1EP28566 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
HTR1EP28566 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
HTR1EP28566 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC17.28■□□□□ 0.36
HTR1EP28566 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
HTR1EP28566 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
HTR1EP28566 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HTR1EP28566 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HTR1EP28566 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
HTR1EP28566 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
HTR1EP28566 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
HTR1EP28566 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
HTR1EP28566 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
HTR1EP28566 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC17.27■□□□□ 0.36
HTR1EP28566 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC17.27■□□□□ 0.36
HTR1EP28566 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
HTR1EP28566 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.36
HTR1EP28566 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC17.27■□□□□ 0.36
HTR1EP28566 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC17.27■□□□□ 0.36
HTR1EP28566 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
HTR1EP28566 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
HTR1EP28566 HIST1H2APS4-201ENST00000362070 348 ntBASIC17.27■□□□□ 0.36
HTR1EP28566 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC17.27■□□□□ 0.36
HTR1EP28566 AC009947.2-201ENST00000444014 672 ntBASIC17.27■□□□□ 0.36
HTR1EP28566 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC17.27■□□□□ 0.36
HTR1EP28566 FDX2-206ENST00000492239 773 ntTSL 2 BASIC17.27■□□□□ 0.36
HTR1EP28566 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
HTR1EP28566 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC17.27■□□□□ 0.36
HTR1EP28566 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC17.27■□□□□ 0.36
HTR1EP28566 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC17.27■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 65.6 ms