Protein–RNA interactions for Protein: P08684

CYP3A4, Cytochrome P450 3A4, humanhuman

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYP3A4P08684 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC20.24■□□□□ 0.83
CYP3A4P08684 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC20.24■□□□□ 0.83
CYP3A4P08684 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC20.24■□□□□ 0.83
CYP3A4P08684 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC20.24■□□□□ 0.83
CYP3A4P08684 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CYP3A4P08684 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
CYP3A4P08684 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC20.24■□□□□ 0.83
CYP3A4P08684 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC20.24■□□□□ 0.83
CYP3A4P08684 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CYP3A4P08684 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC20.24■□□□□ 0.83
CYP3A4P08684 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CYP3A4P08684 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
CYP3A4P08684 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CYP3A4P08684 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CYP3A4P08684 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
CYP3A4P08684 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC20.23■□□□□ 0.83
CYP3A4P08684 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC20.23■□□□□ 0.83
CYP3A4P08684 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CYP3A4P08684 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
CYP3A4P08684 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC20.23■□□□□ 0.83
CYP3A4P08684 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CYP3A4P08684 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
CYP3A4P08684 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CYP3A4P08684 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CYP3A4P08684 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CYP3A4P08684 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC20.23■□□□□ 0.83
CYP3A4P08684 NUS1P2-201ENST00000417358 873 ntBASIC20.23■□□□□ 0.83
CYP3A4P08684 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CYP3A4P08684 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC20.23■□□□□ 0.83
CYP3A4P08684 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
CYP3A4P08684 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC20.23■□□□□ 0.83
CYP3A4P08684 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
CYP3A4P08684 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CYP3A4P08684 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CYP3A4P08684 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CYP3A4P08684 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
CYP3A4P08684 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CYP3A4P08684 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC20.23■□□□□ 0.83
CYP3A4P08684 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CYP3A4P08684 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CYP3A4P08684 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC20.23■□□□□ 0.83
CYP3A4P08684 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CYP3A4P08684 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CYP3A4P08684 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CYP3A4P08684 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC20.23■□□□□ 0.83
CYP3A4P08684 MED29-202ENST00000594368 1471 ntTSL 2 BASIC20.23■□□□□ 0.83
CYP3A4P08684 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CYP3A4P08684 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CYP3A4P08684 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC20.23■□□□□ 0.83
CYP3A4P08684 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC20.23■□□□□ 0.83
CYP3A4P08684 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CYP3A4P08684 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CYP3A4P08684 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC20.22■□□□□ 0.83
CYP3A4P08684 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
CYP3A4P08684 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC20.22■□□□□ 0.83
CYP3A4P08684 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC20.22■□□□□ 0.83
CYP3A4P08684 AC010460.3-201ENST00000511359 1579 ntBASIC20.22■□□□□ 0.83
CYP3A4P08684 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
CYP3A4P08684 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC20.22■□□□□ 0.83
CYP3A4P08684 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CYP3A4P08684 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CYP3A4P08684 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CYP3A4P08684 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC20.22■□□□□ 0.83
CYP3A4P08684 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC20.22■□□□□ 0.83
CYP3A4P08684 TPM1-218ENST00000559281 851 ntTSL 5 BASIC20.22■□□□□ 0.83
CYP3A4P08684 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC20.22■□□□□ 0.83
CYP3A4P08684 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC20.22■□□□□ 0.83
CYP3A4P08684 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC20.22■□□□□ 0.83
CYP3A4P08684 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC20.22■□□□□ 0.83
CYP3A4P08684 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
CYP3A4P08684 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CYP3A4P08684 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CYP3A4P08684 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CYP3A4P08684 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
CYP3A4P08684 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CYP3A4P08684 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CYP3A4P08684 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC20.21■□□□□ 0.83
CYP3A4P08684 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC20.21■□□□□ 0.83
CYP3A4P08684 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC20.21■□□□□ 0.83
CYP3A4P08684 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC20.21■□□□□ 0.83
CYP3A4P08684 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
CYP3A4P08684 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC20.21■□□□□ 0.83
CYP3A4P08684 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
CYP3A4P08684 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC20.21■□□□□ 0.83
CYP3A4P08684 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC20.21■□□□□ 0.83
CYP3A4P08684 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC20.21■□□□□ 0.83
CYP3A4P08684 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC20.21■□□□□ 0.83
CYP3A4P08684 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
CYP3A4P08684 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC20.21■□□□□ 0.83
CYP3A4P08684 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC20.21■□□□□ 0.83
CYP3A4P08684 AC111152.3-201ENST00000569699 673 ntBASIC20.21■□□□□ 0.83
CYP3A4P08684 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
CYP3A4P08684 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CYP3A4P08684 AL591684.3-201ENST00000605187 298 ntBASIC20.21■□□□□ 0.83
CYP3A4P08684 IFNL4P1-201ENST00000607083 540 ntBASIC20.21■□□□□ 0.83
CYP3A4P08684 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
CYP3A4P08684 HLA-DQB1-201ENST00000374943 1656 ntBASIC20.21■□□□□ 0.83
CYP3A4P08684 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CYP3A4P08684 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CYP3A4P08684 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms