Protein–RNA interactions for Protein: O95832

CLDN1, Claudin-1, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1O95832 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC16.1■□□□□ 0.17
CLDN1O95832 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CLDN1O95832 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC16.1■□□□□ 0.17
CLDN1O95832 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CLDN1O95832 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CLDN1O95832 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC16.09■□□□□ 0.17
CLDN1O95832 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
CLDN1O95832 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
CLDN1O95832 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CLDN1O95832 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
CLDN1O95832 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CLDN1O95832 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
CLDN1O95832 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CLDN1O95832 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC16.09■□□□□ 0.17
CLDN1O95832 ENSA-205ENST00000361532 792 ntTSL 2 BASIC16.09■□□□□ 0.17
CLDN1O95832 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC16.09■□□□□ 0.17
CLDN1O95832 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC16.09■□□□□ 0.17
CLDN1O95832 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
CLDN1O95832 COA5-202ENST00000409997 557 ntTSL 4 BASIC16.09■□□□□ 0.17
CLDN1O95832 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CLDN1O95832 RPS2P1-201ENST00000434010 821 ntBASIC16.09■□□□□ 0.17
CLDN1O95832 METTL21AP1-201ENST00000438852 635 ntBASIC16.09■□□□□ 0.17
CLDN1O95832 CYMP-203ENST00000474680 1263 ntBASIC16.09■□□□□ 0.17
CLDN1O95832 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
CLDN1O95832 RNA5SP415-201ENST00000517246 115 ntBASIC16.09■□□□□ 0.17
CLDN1O95832 AC021087.4-201ENST00000563761 564 ntBASIC16.09■□□□□ 0.17
CLDN1O95832 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CLDN1O95832 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC16.09■□□□□ 0.17
CLDN1O95832 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC16.09■□□□□ 0.17
CLDN1O95832 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
CLDN1O95832 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC16.09■□□□□ 0.17
CLDN1O95832 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC16.09■□□□□ 0.17
CLDN1O95832 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CLDN1O95832 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CLDN1O95832 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
CLDN1O95832 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CLDN1O95832 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CLDN1O95832 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CLDN1O95832 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC16.09■□□□□ 0.17
CLDN1O95832 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CLDN1O95832 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC16.09■□□□□ 0.17
CLDN1O95832 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC16.09■□□□□ 0.17
CLDN1O95832 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CLDN1O95832 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
CLDN1O95832 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
CLDN1O95832 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC16.08■□□□□ 0.17
CLDN1O95832 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
CLDN1O95832 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
CLDN1O95832 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
CLDN1O95832 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
CLDN1O95832 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
CLDN1O95832 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC16.08■□□□□ 0.17
CLDN1O95832 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
CLDN1O95832 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC16.08■□□□□ 0.16
CLDN1O95832 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CLDN1O95832 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
CLDN1O95832 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CLDN1O95832 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CLDN1O95832 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
CLDN1O95832 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CLDN1O95832 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
CLDN1O95832 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC16.08■□□□□ 0.16
CLDN1O95832 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CLDN1O95832 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC16.08■□□□□ 0.16
CLDN1O95832 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC16.08■□□□□ 0.16
CLDN1O95832 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC16.08■□□□□ 0.16
CLDN1O95832 AC012640.2-201ENST00000561606 901 ntBASIC16.08■□□□□ 0.16
CLDN1O95832 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC16.08■□□□□ 0.16
CLDN1O95832 MIR3180-4-201ENST00000582223 153 ntBASIC16.08■□□□□ 0.16
CLDN1O95832 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC16.08■□□□□ 0.16
CLDN1O95832 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC16.08■□□□□ 0.16
CLDN1O95832 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC16.08■□□□□ 0.16
CLDN1O95832 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
CLDN1O95832 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC16.08■□□□□ 0.16
CLDN1O95832 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
CLDN1O95832 PKD1P1-201ENST00000458669 6805 ntBASIC16.08■□□□□ 0.16
CLDN1O95832 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
CLDN1O95832 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CLDN1O95832 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC16.08■□□□□ 0.16
CLDN1O95832 HLA-J-201ENST00000462773 1622 ntBASIC16.08■□□□□ 0.16
CLDN1O95832 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC16.08■□□□□ 0.16
CLDN1O95832 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CLDN1O95832 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC16.08■□□□□ 0.16
CLDN1O95832 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
CLDN1O95832 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
CLDN1O95832 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC16.07■□□□□ 0.16
CLDN1O95832 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CLDN1O95832 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CLDN1O95832 AL032819.2-201ENST00000624543 2162 ntBASIC16.07■□□□□ 0.16
CLDN1O95832 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CLDN1O95832 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
CLDN1O95832 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CLDN1O95832 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CLDN1O95832 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
CLDN1O95832 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC16.07■□□□□ 0.16
CLDN1O95832 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
CLDN1O95832 AC004832.2-201ENST00000426397 482 ntBASIC16.07■□□□□ 0.16
CLDN1O95832 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC16.07■□□□□ 0.16
CLDN1O95832 RFPL4AP1-201ENST00000530883 850 ntBASIC16.07■□□□□ 0.16
CLDN1O95832 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC16.07■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 86.1 ms