Protein–RNA interactions for Protein: O95347

SMC2, Structural maintenance of chromosomes protein 2, humanhuman

Predictions only

Length 1,197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC2O95347 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
SMC2O95347 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SMC2O95347 MIR1238-201ENST00000408483 83 ntBASIC20.41■□□□□ 0.86
SMC2O95347 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC20.41■□□□□ 0.86
SMC2O95347 AL390955.1-201ENST00000428694 934 ntBASIC20.41■□□□□ 0.86
SMC2O95347 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC20.41■□□□□ 0.86
SMC2O95347 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SMC2O95347 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC20.41■□□□□ 0.86
SMC2O95347 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
SMC2O95347 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SMC2O95347 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC20.41■□□□□ 0.86
SMC2O95347 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SMC2O95347 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC20.41■□□□□ 0.86
SMC2O95347 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
SMC2O95347 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
SMC2O95347 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SMC2O95347 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SMC2O95347 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC20.4■□□□□ 0.86
SMC2O95347 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SMC2O95347 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SMC2O95347 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SMC2O95347 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
SMC2O95347 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SMC2O95347 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SMC2O95347 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
SMC2O95347 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SMC2O95347 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
SMC2O95347 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
SMC2O95347 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
SMC2O95347 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
SMC2O95347 KIRREL3-AS3-201ENST00000404882 831 ntBASIC20.4■□□□□ 0.86
SMC2O95347 SP100-208ENST00000427101 1922 ntTSL 2 BASIC20.4■□□□□ 0.86
SMC2O95347 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC20.4■□□□□ 0.86
SMC2O95347 GRAMD4P1-201ENST00000435181 1110 ntBASIC20.4■□□□□ 0.86
SMC2O95347 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC20.4■□□□□ 0.86
SMC2O95347 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
SMC2O95347 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
SMC2O95347 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC20.4■□□□□ 0.86
SMC2O95347 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC20.4■□□□□ 0.86
SMC2O95347 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SMC2O95347 AC010653.2-201ENST00000623505 997 ntBASIC20.4■□□□□ 0.86
SMC2O95347 LINC01126-201ENST00000623515 1646 ntBASIC20.4■□□□□ 0.86
SMC2O95347 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
SMC2O95347 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC20.4■□□□□ 0.86
SMC2O95347 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SMC2O95347 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC20.39■□□□□ 0.86
SMC2O95347 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC20.39■□□□□ 0.86
SMC2O95347 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.86
SMC2O95347 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.86
SMC2O95347 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.86
SMC2O95347 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC20.39■□□□□ 0.86
SMC2O95347 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC20.39■□□□□ 0.86
SMC2O95347 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
SMC2O95347 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
SMC2O95347 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
SMC2O95347 AC099398.1-201ENST00000567919 2776 ntBASIC20.39■□□□□ 0.85
SMC2O95347 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SMC2O95347 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC20.39■□□□□ 0.85
SMC2O95347 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC20.39■□□□□ 0.85
SMC2O95347 GXYLT1P6-201ENST00000456472 1187 ntBASIC20.39■□□□□ 0.85
SMC2O95347 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC20.39■□□□□ 0.85
SMC2O95347 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC20.39■□□□□ 0.85
SMC2O95347 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC20.39■□□□□ 0.85
SMC2O95347 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC20.39■□□□□ 0.85
SMC2O95347 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC20.39■□□□□ 0.85
SMC2O95347 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
SMC2O95347 AC009053.2-201ENST00000563701 2365 ntBASIC20.39■□□□□ 0.85
SMC2O95347 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC20.39■□□□□ 0.85
SMC2O95347 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
SMC2O95347 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
SMC2O95347 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC20.39■□□□□ 0.85
SMC2O95347 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
SMC2O95347 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
SMC2O95347 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC20.39■□□□□ 0.85
SMC2O95347 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SMC2O95347 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
SMC2O95347 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
SMC2O95347 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SMC2O95347 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SMC2O95347 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
SMC2O95347 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
SMC2O95347 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
SMC2O95347 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SMC2O95347 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC20.38■□□□□ 0.85
SMC2O95347 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
SMC2O95347 KRT17P2-201ENST00000300992 1314 ntBASIC20.38■□□□□ 0.85
SMC2O95347 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SMC2O95347 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SMC2O95347 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC20.38■□□□□ 0.85
SMC2O95347 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC20.38■□□□□ 0.85
SMC2O95347 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SMC2O95347 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SMC2O95347 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
SMC2O95347 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SMC2O95347 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SMC2O95347 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SMC2O95347 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SMC2O95347 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SMC2O95347 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC20.38■□□□□ 0.85
SMC2O95347 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC20.38■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms