Protein–RNA interactions for Protein: O95243

MBD4, Methyl-CpG-binding domain protein 4, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4O95243 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC21.48■■□□□ 1.03
MBD4O95243 AC091304.2-201ENST00000564639 760 ntBASIC21.48■■□□□ 1.03
MBD4O95243 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
MBD4O95243 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC21.48■■□□□ 1.03
MBD4O95243 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
MBD4O95243 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
MBD4O95243 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
MBD4O95243 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC21.48■■□□□ 1.03
MBD4O95243 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
MBD4O95243 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
MBD4O95243 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
MBD4O95243 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
MBD4O95243 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
MBD4O95243 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
MBD4O95243 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
MBD4O95243 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
MBD4O95243 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
MBD4O95243 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
MBD4O95243 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
MBD4O95243 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
MBD4O95243 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
MBD4O95243 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC21.47■■□□□ 1.03
MBD4O95243 AP000997.3-201ENST00000623333 2250 ntBASIC21.47■■□□□ 1.03
MBD4O95243 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
MBD4O95243 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
MBD4O95243 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
MBD4O95243 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
MBD4O95243 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
MBD4O95243 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
MBD4O95243 AC111152.3-201ENST00000569699 673 ntBASIC21.47■■□□□ 1.03
MBD4O95243 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC21.47■■□□□ 1.03
MBD4O95243 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
MBD4O95243 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC21.47■■□□□ 1.03
MBD4O95243 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
MBD4O95243 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
MBD4O95243 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
MBD4O95243 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC21.47■■□□□ 1.03
MBD4O95243 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
MBD4O95243 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC21.47■■□□□ 1.03
MBD4O95243 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
MBD4O95243 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
MBD4O95243 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
MBD4O95243 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC21.46■■□□□ 1.03
MBD4O95243 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
MBD4O95243 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
MBD4O95243 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC21.46■■□□□ 1.03
MBD4O95243 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
MBD4O95243 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
MBD4O95243 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
MBD4O95243 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC21.46■■□□□ 1.03
MBD4O95243 PP7080-204ENST00000510714 601 ntTSL 3 BASIC21.46■■□□□ 1.03
MBD4O95243 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC21.46■■□□□ 1.03
MBD4O95243 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC21.46■■□□□ 1.03
MBD4O95243 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC21.46■■□□□ 1.03
MBD4O95243 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC21.46■■□□□ 1.03
MBD4O95243 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
MBD4O95243 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
MBD4O95243 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC21.46■■□□□ 1.03
MBD4O95243 AC100803.2-201ENST00000562459 1963 ntBASIC21.46■■□□□ 1.03
MBD4O95243 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
MBD4O95243 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
MBD4O95243 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
MBD4O95243 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC21.46■■□□□ 1.03
MBD4O95243 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC21.46■■□□□ 1.03
MBD4O95243 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
MBD4O95243 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.03
MBD4O95243 TP73-AS1-210ENST00000637775 1455 ntBASIC21.45■■□□□ 1.03
MBD4O95243 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.03
MBD4O95243 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
MBD4O95243 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC21.45■■□□□ 1.02
MBD4O95243 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
MBD4O95243 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC21.45■■□□□ 1.02
MBD4O95243 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
MBD4O95243 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
MBD4O95243 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
MBD4O95243 CCS-201ENST00000310190 942 ntTSL 5 BASIC21.45■■□□□ 1.02
MBD4O95243 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
MBD4O95243 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC21.45■■□□□ 1.02
MBD4O95243 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC21.45■■□□□ 1.02
MBD4O95243 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC21.45■■□□□ 1.02
MBD4O95243 RN7SL510P-201ENST00000581311 263 ntBASIC21.45■■□□□ 1.02
MBD4O95243 IGHV3OR16-7-201ENST00000604106 360 ntBASIC21.45■■□□□ 1.02
MBD4O95243 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
MBD4O95243 AC114341.1-201ENST00000618070 349 ntBASIC21.45■■□□□ 1.02
MBD4O95243 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
MBD4O95243 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC21.45■■□□□ 1.02
MBD4O95243 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC21.45■■□□□ 1.02
MBD4O95243 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
MBD4O95243 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
MBD4O95243 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
MBD4O95243 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
MBD4O95243 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
MBD4O95243 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
MBD4O95243 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC21.44■■□□□ 1.02
MBD4O95243 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
MBD4O95243 COMP-202ENST00000425807 2292 ntTSL 2 BASIC21.44■■□□□ 1.02
MBD4O95243 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
MBD4O95243 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC21.44■■□□□ 1.02
MBD4O95243 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC21.44■■□□□ 1.02
MBD4O95243 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC21.44■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms