Protein–RNA interactions for Protein: O95196

CSPG5, Chondroitin sulfate proteoglycan 5, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5O95196 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
CSPG5O95196 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
CSPG5O95196 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
CSPG5O95196 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
CSPG5O95196 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC19.33■□□□□ 0.69
CSPG5O95196 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
CSPG5O95196 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CSPG5O95196 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
CSPG5O95196 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CSPG5O95196 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CSPG5O95196 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC19.33■□□□□ 0.68
CSPG5O95196 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC19.33■□□□□ 0.68
CSPG5O95196 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC19.33■□□□□ 0.68
CSPG5O95196 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC19.33■□□□□ 0.68
CSPG5O95196 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC19.33■□□□□ 0.68
CSPG5O95196 GZMM-202ENST00000592501 941 ntTSL 3 BASIC19.33■□□□□ 0.68
CSPG5O95196 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
CSPG5O95196 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CSPG5O95196 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC19.33■□□□□ 0.68
CSPG5O95196 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
CSPG5O95196 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.68
CSPG5O95196 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
CSPG5O95196 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC19.33■□□□□ 0.68
CSPG5O95196 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CSPG5O95196 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
CSPG5O95196 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC19.32■□□□□ 0.68
CSPG5O95196 MEG3-211ENST00000452514 461 ntTSL 3 BASIC19.32■□□□□ 0.68
CSPG5O95196 AC068472.1-201ENST00000474589 881 ntBASIC19.32■□□□□ 0.68
CSPG5O95196 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC19.32■□□□□ 0.68
CSPG5O95196 PGAM5P1-201ENST00000518923 814 ntBASIC19.32■□□□□ 0.68
CSPG5O95196 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC19.32■□□□□ 0.68
CSPG5O95196 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC19.32■□□□□ 0.68
CSPG5O95196 AC027601.4-201ENST00000611259 610 ntBASIC19.32■□□□□ 0.68
CSPG5O95196 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CSPG5O95196 HOTTIP_1.1-201ENST00000620415 57 ntBASIC19.32■□□□□ 0.68
CSPG5O95196 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC19.32■□□□□ 0.68
CSPG5O95196 AC009102.3-201ENST00000623118 1491 ntBASIC19.32■□□□□ 0.68
CSPG5O95196 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC19.32■□□□□ 0.68
CSPG5O95196 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC19.32■□□□□ 0.68
CSPG5O95196 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
CSPG5O95196 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CSPG5O95196 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
CSPG5O95196 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC19.31■□□□□ 0.68
CSPG5O95196 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CSPG5O95196 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CSPG5O95196 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CSPG5O95196 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC19.31■□□□□ 0.68
CSPG5O95196 RPS2P28-201ENST00000314255 741 ntBASIC19.31■□□□□ 0.68
CSPG5O95196 RBM17P3-201ENST00000417687 1192 ntBASIC19.31■□□□□ 0.68
CSPG5O95196 AC007967.2-201ENST00000432613 625 ntBASIC19.31■□□□□ 0.68
CSPG5O95196 HMGN1P19-201ENST00000436976 333 ntBASIC19.31■□□□□ 0.68
CSPG5O95196 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC19.31■□□□□ 0.68
CSPG5O95196 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC19.31■□□□□ 0.68
CSPG5O95196 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC19.31■□□□□ 0.68
CSPG5O95196 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC19.31■□□□□ 0.68
CSPG5O95196 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CSPG5O95196 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CSPG5O95196 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CSPG5O95196 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CSPG5O95196 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC19.31■□□□□ 0.68
CSPG5O95196 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC19.31■□□□□ 0.68
CSPG5O95196 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CSPG5O95196 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CSPG5O95196 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
CSPG5O95196 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CSPG5O95196 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
CSPG5O95196 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CSPG5O95196 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
CSPG5O95196 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CSPG5O95196 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC19.3■□□□□ 0.68
CSPG5O95196 BCL2-203ENST00000589955 5011 ntBASIC19.3■□□□□ 0.68
CSPG5O95196 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
CSPG5O95196 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
CSPG5O95196 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CSPG5O95196 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CSPG5O95196 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CSPG5O95196 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CSPG5O95196 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CSPG5O95196 MIR149-201ENST00000384879 89 ntBASIC19.3■□□□□ 0.68
CSPG5O95196 CENPM-204ENST00000402420 688 ntTSL 5 BASIC19.3■□□□□ 0.68
CSPG5O95196 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC19.3■□□□□ 0.68
CSPG5O95196 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CSPG5O95196 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CSPG5O95196 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC19.3■□□□□ 0.68
CSPG5O95196 AL499627.1-201ENST00000569373 2188 ntBASIC19.3■□□□□ 0.68
CSPG5O95196 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC19.3■□□□□ 0.68
CSPG5O95196 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC19.3■□□□□ 0.68
CSPG5O95196 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC19.3■□□□□ 0.68
CSPG5O95196 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CSPG5O95196 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CSPG5O95196 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
CSPG5O95196 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC19.29■□□□□ 0.68
CSPG5O95196 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC19.29■□□□□ 0.68
CSPG5O95196 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC19.29■□□□□ 0.68
CSPG5O95196 HLA-J-201ENST00000462773 1622 ntBASIC19.29■□□□□ 0.68
CSPG5O95196 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CSPG5O95196 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC19.29■□□□□ 0.68
CSPG5O95196 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC19.29■□□□□ 0.68
CSPG5O95196 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CSPG5O95196 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms