Protein–RNA interactions for Protein: O75489

NDUFS3, NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial, humanhuman

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS3O75489 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
NDUFS3O75489 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
NDUFS3O75489 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC18.01■□□□□ 0.47
NDUFS3O75489 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
NDUFS3O75489 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
NDUFS3O75489 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC18.01■□□□□ 0.47
NDUFS3O75489 AC024563.2-201ENST00000603282 481 ntBASIC18.01■□□□□ 0.47
NDUFS3O75489 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC18.01■□□□□ 0.47
NDUFS3O75489 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC18.01■□□□□ 0.47
NDUFS3O75489 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC18.01■□□□□ 0.47
NDUFS3O75489 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC18.01■□□□□ 0.47
NDUFS3O75489 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
NDUFS3O75489 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
NDUFS3O75489 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC18.01■□□□□ 0.47
NDUFS3O75489 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
NDUFS3O75489 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC18.01■□□□□ 0.47
NDUFS3O75489 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
NDUFS3O75489 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
NDUFS3O75489 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC18■□□□□ 0.47
NDUFS3O75489 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
NDUFS3O75489 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC18■□□□□ 0.47
NDUFS3O75489 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC18■□□□□ 0.47
NDUFS3O75489 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC18■□□□□ 0.47
NDUFS3O75489 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
NDUFS3O75489 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC18■□□□□ 0.47
NDUFS3O75489 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
NDUFS3O75489 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
NDUFS3O75489 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC18■□□□□ 0.47
NDUFS3O75489 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC18■□□□□ 0.47
NDUFS3O75489 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC18■□□□□ 0.47
NDUFS3O75489 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
NDUFS3O75489 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
NDUFS3O75489 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC18■□□□□ 0.47
NDUFS3O75489 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
NDUFS3O75489 FAM8A6P-201ENST00000407496 1135 ntBASIC18■□□□□ 0.47
NDUFS3O75489 SPDYE15P-201ENST00000424157 909 ntBASIC18■□□□□ 0.47
NDUFS3O75489 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
NDUFS3O75489 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC18■□□□□ 0.47
NDUFS3O75489 SNX5-210ENST00000481323 562 ntTSL 3 BASIC18■□□□□ 0.47
NDUFS3O75489 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
NDUFS3O75489 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC18■□□□□ 0.47
NDUFS3O75489 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
NDUFS3O75489 AC079602.3-201ENST00000623931 403 ntBASIC18■□□□□ 0.47
NDUFS3O75489 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
NDUFS3O75489 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC18■□□□□ 0.47
NDUFS3O75489 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC18■□□□□ 0.47
NDUFS3O75489 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
NDUFS3O75489 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
NDUFS3O75489 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
NDUFS3O75489 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC18■□□□□ 0.47
NDUFS3O75489 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC18■□□□□ 0.47
NDUFS3O75489 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
NDUFS3O75489 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
NDUFS3O75489 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
NDUFS3O75489 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
NDUFS3O75489 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC17.99■□□□□ 0.47
NDUFS3O75489 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
NDUFS3O75489 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
NDUFS3O75489 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC17.99■□□□□ 0.47
NDUFS3O75489 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
NDUFS3O75489 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
NDUFS3O75489 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
NDUFS3O75489 HOMER2P1-201ENST00000455653 964 ntBASIC17.99■□□□□ 0.47
NDUFS3O75489 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
NDUFS3O75489 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC17.99■□□□□ 0.47
NDUFS3O75489 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC17.99■□□□□ 0.47
NDUFS3O75489 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC17.99■□□□□ 0.47
NDUFS3O75489 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC17.99■□□□□ 0.47
NDUFS3O75489 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
NDUFS3O75489 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC17.99■□□□□ 0.47
NDUFS3O75489 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
NDUFS3O75489 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
NDUFS3O75489 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
NDUFS3O75489 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
NDUFS3O75489 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
NDUFS3O75489 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC17.99■□□□□ 0.47
NDUFS3O75489 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
NDUFS3O75489 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
NDUFS3O75489 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
NDUFS3O75489 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
NDUFS3O75489 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
NDUFS3O75489 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC17.98■□□□□ 0.47
NDUFS3O75489 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
NDUFS3O75489 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
NDUFS3O75489 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
NDUFS3O75489 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
NDUFS3O75489 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
NDUFS3O75489 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
NDUFS3O75489 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
NDUFS3O75489 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
NDUFS3O75489 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
NDUFS3O75489 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
NDUFS3O75489 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
NDUFS3O75489 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC17.98■□□□□ 0.47
NDUFS3O75489 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
NDUFS3O75489 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
NDUFS3O75489 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC17.98■□□□□ 0.47
NDUFS3O75489 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
NDUFS3O75489 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
NDUFS3O75489 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms