Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SMAD6O43541 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SMAD6O43541 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SMAD6O43541 MEG3-211ENST00000452514 461 ntTSL 3 BASIC18.19■□□□□ 0.5
SMAD6O43541 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC18.19■□□□□ 0.5
SMAD6O43541 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC18.19■□□□□ 0.5
SMAD6O43541 AC096582.2-201ENST00000510860 516 ntBASIC18.19■□□□□ 0.5
SMAD6O43541 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC18.19■□□□□ 0.5
SMAD6O43541 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SMAD6O43541 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SMAD6O43541 RN7SL510P-201ENST00000581311 263 ntBASIC18.19■□□□□ 0.5
SMAD6O43541 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC18.19■□□□□ 0.5
SMAD6O43541 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SMAD6O43541 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SMAD6O43541 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
SMAD6O43541 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SMAD6O43541 BICD1-207ENST00000551848 1962 ntBASIC18.19■□□□□ 0.5
SMAD6O43541 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC18.19■□□□□ 0.5
SMAD6O43541 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
SMAD6O43541 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SMAD6O43541 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC18.18■□□□□ 0.5
SMAD6O43541 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC18.18■□□□□ 0.5
SMAD6O43541 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC18.18■□□□□ 0.5
SMAD6O43541 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC18.18■□□□□ 0.5
SMAD6O43541 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SMAD6O43541 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SMAD6O43541 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC18.18■□□□□ 0.5
SMAD6O43541 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
SMAD6O43541 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SMAD6O43541 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SMAD6O43541 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
SMAD6O43541 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SMAD6O43541 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
SMAD6O43541 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC18.18■□□□□ 0.5
SMAD6O43541 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SMAD6O43541 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC18.18■□□□□ 0.5
SMAD6O43541 AC111152.3-201ENST00000569699 673 ntBASIC18.18■□□□□ 0.5
SMAD6O43541 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC18.18■□□□□ 0.5
SMAD6O43541 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SMAD6O43541 TP73-AS1-210ENST00000637775 1455 ntBASIC18.18■□□□□ 0.5
SMAD6O43541 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
SMAD6O43541 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC18.18■□□□□ 0.5
SMAD6O43541 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SMAD6O43541 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SMAD6O43541 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SMAD6O43541 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SMAD6O43541 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SMAD6O43541 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SMAD6O43541 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
SMAD6O43541 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC18.18■□□□□ 0.5
SMAD6O43541 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
SMAD6O43541 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
SMAD6O43541 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SMAD6O43541 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
SMAD6O43541 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SMAD6O43541 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
SMAD6O43541 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
SMAD6O43541 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SMAD6O43541 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SMAD6O43541 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC18.17■□□□□ 0.5
SMAD6O43541 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC18.17■□□□□ 0.5
SMAD6O43541 CCS-201ENST00000310190 942 ntTSL 5 BASIC18.17■□□□□ 0.5
SMAD6O43541 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SMAD6O43541 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SMAD6O43541 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC18.17■□□□□ 0.5
SMAD6O43541 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
SMAD6O43541 RCN1P2-201ENST00000398357 915 ntBASIC18.17■□□□□ 0.5
SMAD6O43541 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC18.17■□□□□ 0.5
SMAD6O43541 EMBP1-201ENST00000458200 901 ntBASIC18.17■□□□□ 0.5
SMAD6O43541 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC18.17■□□□□ 0.5
SMAD6O43541 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC18.17■□□□□ 0.5
SMAD6O43541 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC18.17■□□□□ 0.5
SMAD6O43541 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC18.17■□□□□ 0.5
SMAD6O43541 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC18.17■□□□□ 0.5
SMAD6O43541 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC18.17■□□□□ 0.5
SMAD6O43541 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SMAD6O43541 IGHV3OR16-7-201ENST00000604106 360 ntBASIC18.17■□□□□ 0.5
SMAD6O43541 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC18.17■□□□□ 0.5
SMAD6O43541 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
SMAD6O43541 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SMAD6O43541 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SMAD6O43541 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SMAD6O43541 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC18.17■□□□□ 0.5
SMAD6O43541 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC18.17■□□□□ 0.5
SMAD6O43541 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SMAD6O43541 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SMAD6O43541 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SMAD6O43541 AC100803.2-201ENST00000562459 1963 ntBASIC18.17■□□□□ 0.5
SMAD6O43541 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC18.17■□□□□ 0.5
SMAD6O43541 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
SMAD6O43541 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
SMAD6O43541 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SMAD6O43541 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SMAD6O43541 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SMAD6O43541 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SMAD6O43541 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC18.16■□□□□ 0.5
SMAD6O43541 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SMAD6O43541 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC18.16■□□□□ 0.5
SMAD6O43541 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SMAD6O43541 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC18.16■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms