Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC28.94■■■□□ 2.22
CHD1O14646 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC28.94■■■□□ 2.22
CHD1O14646 AL355306.1-201ENST00000415580 579 ntBASIC28.94■■■□□ 2.22
CHD1O14646 HNRNPA1P40-201ENST00000426371 1278 ntBASIC28.94■■■□□ 2.22
CHD1O14646 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC28.94■■■□□ 2.22
CHD1O14646 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC28.94■■■□□ 2.22
CHD1O14646 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC28.94■■■□□ 2.22
CHD1O14646 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC28.94■■■□□ 2.22
CHD1O14646 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC28.94■■■□□ 2.22
CHD1O14646 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC28.94■■■□□ 2.22
CHD1O14646 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC28.94■■■□□ 2.22
CHD1O14646 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC28.94■■■□□ 2.22
CHD1O14646 VMA21-202ENST00000370361 693 ntTSL 5 BASIC28.94■■■□□ 2.22
CHD1O14646 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC28.94■■■□□ 2.22
CHD1O14646 BASP1P1-201ENST00000430708 665 ntBASIC28.94■■■□□ 2.22
CHD1O14646 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC28.94■■■□□ 2.22
CHD1O14646 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC28.94■■■□□ 2.22
CHD1O14646 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC28.94■■■□□ 2.22
CHD1O14646 SPDYE22P-201ENST00000582158 798 ntBASIC28.94■■■□□ 2.22
CHD1O14646 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC28.94■■■□□ 2.22
CHD1O14646 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC28.94■■■□□ 2.22
CHD1O14646 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC28.93■■■□□ 2.22
CHD1O14646 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC28.93■■■□□ 2.22
CHD1O14646 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC28.93■■■□□ 2.22
CHD1O14646 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC28.93■■■□□ 2.22
CHD1O14646 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC28.93■■■□□ 2.22
CHD1O14646 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC28.93■■■□□ 2.22
CHD1O14646 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC28.93■■■□□ 2.22
CHD1O14646 HNRNPFP1-201ENST00000391730 1133 ntBASIC28.93■■■□□ 2.22
CHD1O14646 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC28.93■■■□□ 2.22
CHD1O14646 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC28.93■■■□□ 2.22
CHD1O14646 SRP9-204ENST00000619790 377 ntTSL 2 BASIC28.93■■■□□ 2.22
CHD1O14646 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC28.93■■■□□ 2.22
CHD1O14646 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC28.93■■■□□ 2.22
CHD1O14646 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC28.92■■■□□ 2.22
CHD1O14646 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC28.92■■■□□ 2.22
CHD1O14646 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC28.92■■■□□ 2.22
CHD1O14646 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC28.92■■■□□ 2.22
CHD1O14646 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC28.92■■■□□ 2.22
CHD1O14646 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC28.92■■■□□ 2.22
CHD1O14646 RAC2-204ENST00000406508 893 ntTSL 5 BASIC28.92■■■□□ 2.22
CHD1O14646 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC28.92■■■□□ 2.22
CHD1O14646 TREML5P-201ENST00000421694 576 ntBASIC28.92■■■□□ 2.22
CHD1O14646 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC28.92■■■□□ 2.22
CHD1O14646 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC28.92■■■□□ 2.22
CHD1O14646 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC28.92■■■□□ 2.22
CHD1O14646 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC28.92■■■□□ 2.22
CHD1O14646 SNAI3-AS1-205ENST00000568633 2096 ntBASIC28.92■■■□□ 2.22
CHD1O14646 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC28.92■■■□□ 2.22
CHD1O14646 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC28.92■■■□□ 2.22
CHD1O14646 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC28.92■■■□□ 2.22
CHD1O14646 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC28.92■■■□□ 2.22
CHD1O14646 AC112191.1-201ENST00000523689 701 ntBASIC28.91■■■□□ 2.22
CHD1O14646 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC28.91■■■□□ 2.22
CHD1O14646 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC28.91■■■□□ 2.22
CHD1O14646 AL359881.2-201ENST00000602973 570 ntBASIC28.91■■■□□ 2.22
CHD1O14646 GGTLC5P-201ENST00000617623 998 ntBASIC28.91■■■□□ 2.22
CHD1O14646 FUT8-AS1-201ENST00000621019 1521 ntBASIC28.91■■■□□ 2.22
CHD1O14646 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC28.91■■■□□ 2.22
CHD1O14646 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC28.91■■■□□ 2.22
CHD1O14646 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC28.91■■■□□ 2.22
CHD1O14646 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC28.91■■■□□ 2.22
CHD1O14646 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC28.91■■■□□ 2.22
CHD1O14646 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC28.91■■■□□ 2.22
CHD1O14646 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC28.91■■■□□ 2.22
CHD1O14646 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC28.91■■■□□ 2.22
CHD1O14646 AC103564.2-201ENST00000432853 1299 ntBASIC28.91■■■□□ 2.22
CHD1O14646 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC28.91■■■□□ 2.22
CHD1O14646 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC28.91■■■□□ 2.22
CHD1O14646 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC28.91■■■□□ 2.22
CHD1O14646 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC28.91■■■□□ 2.22
CHD1O14646 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC28.91■■■□□ 2.22
CHD1O14646 AC125437.2-201ENST00000625180 2167 ntBASIC28.9■■■□□ 2.22
CHD1O14646 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC28.9■■■□□ 2.22
CHD1O14646 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC28.9■■■□□ 2.22
CHD1O14646 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC28.9■■■□□ 2.22
CHD1O14646 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC28.9■■■□□ 2.22
CHD1O14646 GOLGA6L11P-201ENST00000417252 1298 ntBASIC28.9■■■□□ 2.22
CHD1O14646 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC28.9■■■□□ 2.22
CHD1O14646 NKTR-203ENST00000442970 646 ntTSL 2 BASIC28.9■■■□□ 2.22
CHD1O14646 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC28.9■■■□□ 2.22
CHD1O14646 AC069335.1-201ENST00000489972 472 ntBASIC28.9■■■□□ 2.22
CHD1O14646 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC28.9■■■□□ 2.22
CHD1O14646 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC28.9■■■□□ 2.22
CHD1O14646 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC28.9■■■□□ 2.22
CHD1O14646 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC28.9■■■□□ 2.22
CHD1O14646 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC28.9■■■□□ 2.22
CHD1O14646 SIRPAP1-201ENST00000448467 1770 ntBASIC28.9■■■□□ 2.22
CHD1O14646 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC28.89■■■□□ 2.22
CHD1O14646 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC28.89■■■□□ 2.22
CHD1O14646 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC28.89■■■□□ 2.22
CHD1O14646 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC28.89■■■□□ 2.22
CHD1O14646 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC28.89■■■□□ 2.22
CHD1O14646 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC28.89■■■□□ 2.22
CHD1O14646 AC107890.1-201ENST00000422478 521 ntBASIC28.89■■■□□ 2.22
CHD1O14646 SPDYE11-202ENST00000450699 704 ntBASIC28.89■■■□□ 2.22
CHD1O14646 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC28.89■■■□□ 2.22
CHD1O14646 SPDYE9P-201ENST00000570642 692 ntBASIC28.89■■■□□ 2.22
CHD1O14646 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC28.89■■■□□ 2.22
CHD1O14646 SPDYE10P-202ENST00000612005 668 ntBASIC28.89■■■□□ 2.22
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms