Protein–RNA interactions for Protein: A6NNA2

SRRM3, Serine/arginine repetitive matrix protein 3, humanhuman

Predicted RBP Predictions only

Length 597 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM3A6NNA2 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
SRRM3A6NNA2 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
SRRM3A6NNA2 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SRRM3A6NNA2 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SRRM3A6NNA2 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SRRM3A6NNA2 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
SRRM3A6NNA2 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC18.72■□□□□ 0.59
SRRM3A6NNA2 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SRRM3A6NNA2 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC18.72■□□□□ 0.59
SRRM3A6NNA2 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC18.72■□□□□ 0.59
SRRM3A6NNA2 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
SRRM3A6NNA2 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
SRRM3A6NNA2 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC18.72■□□□□ 0.59
SRRM3A6NNA2 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
SRRM3A6NNA2 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SRRM3A6NNA2 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SRRM3A6NNA2 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SRRM3A6NNA2 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SRRM3A6NNA2 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SRRM3A6NNA2 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
SRRM3A6NNA2 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SRRM3A6NNA2 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SRRM3A6NNA2 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
SRRM3A6NNA2 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC18.71■□□□□ 0.59
SRRM3A6NNA2 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC18.71■□□□□ 0.59
SRRM3A6NNA2 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SRRM3A6NNA2 AL845331.1-201ENST00000424978 1190 ntBASIC18.71■□□□□ 0.59
SRRM3A6NNA2 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC18.71■□□□□ 0.59
SRRM3A6NNA2 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC18.71■□□□□ 0.59
SRRM3A6NNA2 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
SRRM3A6NNA2 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
SRRM3A6NNA2 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SRRM3A6NNA2 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SRRM3A6NNA2 KRT8P8-201ENST00000434750 1448 ntBASIC18.71■□□□□ 0.59
SRRM3A6NNA2 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
SRRM3A6NNA2 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SRRM3A6NNA2 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SRRM3A6NNA2 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SRRM3A6NNA2 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SRRM3A6NNA2 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SRRM3A6NNA2 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SRRM3A6NNA2 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC18.71■□□□□ 0.59
SRRM3A6NNA2 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SRRM3A6NNA2 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SRRM3A6NNA2 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC18.71■□□□□ 0.59
SRRM3A6NNA2 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC18.71■□□□□ 0.59
SRRM3A6NNA2 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC18.71■□□□□ 0.59
SRRM3A6NNA2 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC18.71■□□□□ 0.59
SRRM3A6NNA2 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SRRM3A6NNA2 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SRRM3A6NNA2 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SRRM3A6NNA2 HLA-DQB1-201ENST00000374943 1656 ntBASIC18.7■□□□□ 0.58
SRRM3A6NNA2 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SRRM3A6NNA2 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SRRM3A6NNA2 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
SRRM3A6NNA2 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SRRM3A6NNA2 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
SRRM3A6NNA2 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
SRRM3A6NNA2 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
SRRM3A6NNA2 DAP-202ENST00000432074 1048 ntTSL 2 BASIC18.7■□□□□ 0.58
SRRM3A6NNA2 KRT17P6-201ENST00000453795 1220 ntBASIC18.7■□□□□ 0.58
SRRM3A6NNA2 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
SRRM3A6NNA2 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC18.7■□□□□ 0.58
SRRM3A6NNA2 PTK2-216ENST00000519881 863 ntTSL 3 BASIC18.7■□□□□ 0.58
SRRM3A6NNA2 AC026271.3-201ENST00000571884 352 ntBASIC18.7■□□□□ 0.58
SRRM3A6NNA2 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC18.7■□□□□ 0.58
SRRM3A6NNA2 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
SRRM3A6NNA2 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SRRM3A6NNA2 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
SRRM3A6NNA2 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SRRM3A6NNA2 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SRRM3A6NNA2 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC18.7■□□□□ 0.58
SRRM3A6NNA2 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
SRRM3A6NNA2 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC18.7■□□□□ 0.58
SRRM3A6NNA2 BANP-227ENST00000626016 2144 ntTSL 2 BASIC18.7■□□□□ 0.58
SRRM3A6NNA2 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC18.7■□□□□ 0.58
SRRM3A6NNA2 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC18.69■□□□□ 0.58
SRRM3A6NNA2 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SRRM3A6NNA2 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC18.69■□□□□ 0.58
SRRM3A6NNA2 KRT8P45-201ENST00000414328 1447 ntBASIC18.69■□□□□ 0.58
SRRM3A6NNA2 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
SRRM3A6NNA2 AC004870.1-201ENST00000315132 882 ntBASIC18.69■□□□□ 0.58
SRRM3A6NNA2 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SRRM3A6NNA2 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC18.69■□□□□ 0.58
SRRM3A6NNA2 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC18.69■□□□□ 0.58
SRRM3A6NNA2 AL359075.1-203ENST00000462729 1002 ntBASIC18.69■□□□□ 0.58
SRRM3A6NNA2 B3GAT3P1-201ENST00000471720 806 ntBASIC18.69■□□□□ 0.58
SRRM3A6NNA2 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SRRM3A6NNA2 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
SRRM3A6NNA2 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
SRRM3A6NNA2 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
SRRM3A6NNA2 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
SRRM3A6NNA2 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SRRM3A6NNA2 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SRRM3A6NNA2 AL499627.1-201ENST00000569373 2188 ntBASIC18.69■□□□□ 0.58
SRRM3A6NNA2 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SRRM3A6NNA2 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
SRRM3A6NNA2 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SRRM3A6NNA2 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SRRM3A6NNA2 AC046158.3-201ENST00000624947 2558 ntBASIC18.69■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms