Protein–RNA interactions for Protein: Q9Y625

GPC6, Glypican-6, humanhuman

Predicted RBP Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6Q9Y625 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
GPC6Q9Y625 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC17.12■□□□□ 0.33
GPC6Q9Y625 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC17.11■□□□□ 0.33
GPC6Q9Y625 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
GPC6Q9Y625 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
GPC6Q9Y625 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
GPC6Q9Y625 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
GPC6Q9Y625 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
GPC6Q9Y625 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
GPC6Q9Y625 TSPY14P-201ENST00000303979 915 ntBASIC17.11■□□□□ 0.33
GPC6Q9Y625 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
GPC6Q9Y625 HIST1H2APS4-201ENST00000362070 348 ntBASIC17.11■□□□□ 0.33
GPC6Q9Y625 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
GPC6Q9Y625 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
GPC6Q9Y625 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC17.11■□□□□ 0.33
GPC6Q9Y625 EGLN1P1-201ENST00000531623 762 ntBASIC17.11■□□□□ 0.33
GPC6Q9Y625 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
GPC6Q9Y625 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
GPC6Q9Y625 MIR3180-5-201ENST00000583743 153 ntBASIC17.11■□□□□ 0.33
GPC6Q9Y625 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
GPC6Q9Y625 AC116562.4-202ENST00000641738 218 ntBASIC17.11■□□□□ 0.33
GPC6Q9Y625 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
GPC6Q9Y625 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC17.11■□□□□ 0.33
GPC6Q9Y625 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
GPC6Q9Y625 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
GPC6Q9Y625 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
GPC6Q9Y625 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC17.11■□□□□ 0.33
GPC6Q9Y625 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
GPC6Q9Y625 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC17.11■□□□□ 0.33
GPC6Q9Y625 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
GPC6Q9Y625 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
GPC6Q9Y625 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
GPC6Q9Y625 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
GPC6Q9Y625 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
GPC6Q9Y625 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
GPC6Q9Y625 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC17.11■□□□□ 0.33
GPC6Q9Y625 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
GPC6Q9Y625 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
GPC6Q9Y625 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
GPC6Q9Y625 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC17.1■□□□□ 0.33
GPC6Q9Y625 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC17.1■□□□□ 0.33
GPC6Q9Y625 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
GPC6Q9Y625 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
GPC6Q9Y625 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC17.1■□□□□ 0.33
GPC6Q9Y625 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC17.1■□□□□ 0.33
GPC6Q9Y625 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
GPC6Q9Y625 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC17.1■□□□□ 0.33
GPC6Q9Y625 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC17.1■□□□□ 0.33
GPC6Q9Y625 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
GPC6Q9Y625 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
GPC6Q9Y625 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
GPC6Q9Y625 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
GPC6Q9Y625 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
GPC6Q9Y625 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
GPC6Q9Y625 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
GPC6Q9Y625 SLC25A6P5-201ENST00000435663 894 ntBASIC17.1■□□□□ 0.33
GPC6Q9Y625 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
GPC6Q9Y625 AC128688.1-201ENST00000487626 519 ntBASIC17.1■□□□□ 0.33
GPC6Q9Y625 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC17.1■□□□□ 0.33
GPC6Q9Y625 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC17.1■□□□□ 0.33
GPC6Q9Y625 MIR4674-201ENST00000582457 87 ntBASIC17.1■□□□□ 0.33
GPC6Q9Y625 AL023803.3-201ENST00000615559 522 ntBASIC17.1■□□□□ 0.33
GPC6Q9Y625 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
GPC6Q9Y625 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
GPC6Q9Y625 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
GPC6Q9Y625 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC17.1■□□□□ 0.33
GPC6Q9Y625 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
GPC6Q9Y625 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC17.1■□□□□ 0.33
GPC6Q9Y625 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC17.1■□□□□ 0.33
GPC6Q9Y625 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
GPC6Q9Y625 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC17.1■□□□□ 0.33
GPC6Q9Y625 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
GPC6Q9Y625 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
GPC6Q9Y625 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
GPC6Q9Y625 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
GPC6Q9Y625 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
GPC6Q9Y625 REXO1L9P-201ENST00000604264 2108 ntBASIC17.09■□□□□ 0.33
GPC6Q9Y625 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC17.09■□□□□ 0.33
GPC6Q9Y625 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC17.09■□□□□ 0.33
GPC6Q9Y625 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
GPC6Q9Y625 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
GPC6Q9Y625 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
GPC6Q9Y625 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
GPC6Q9Y625 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
GPC6Q9Y625 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
GPC6Q9Y625 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
GPC6Q9Y625 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
GPC6Q9Y625 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC17.09■□□□□ 0.33
GPC6Q9Y625 GXYLT1P3-201ENST00000453058 1193 ntBASIC17.09■□□□□ 0.33
GPC6Q9Y625 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC17.09■□□□□ 0.33
GPC6Q9Y625 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
GPC6Q9Y625 AL353719.1-201ENST00000566847 864 ntBASIC17.09■□□□□ 0.33
GPC6Q9Y625 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC17.09■□□□□ 0.33
GPC6Q9Y625 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC17.09■□□□□ 0.33
GPC6Q9Y625 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
GPC6Q9Y625 GMCL1P1-201ENST00000463439 1581 ntBASIC17.09■□□□□ 0.33
GPC6Q9Y625 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
GPC6Q9Y625 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
GPC6Q9Y625 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
GPC6Q9Y625 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms