Protein–RNA interactions for Protein: Q9XRX5

HHLA3, HERV-H LTR-associating protein 3, humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HHLA3Q9XRX5 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
HHLA3Q9XRX5 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
HHLA3Q9XRX5 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC13.25□□□□□ -0.29
HHLA3Q9XRX5 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
HHLA3Q9XRX5 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
HHLA3Q9XRX5 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC13.25□□□□□ -0.29
HHLA3Q9XRX5 AC008894.3-201ENST00000624324 3103 ntBASIC13.25□□□□□ -0.29
HHLA3Q9XRX5 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
HHLA3Q9XRX5 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
HHLA3Q9XRX5 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
HHLA3Q9XRX5 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
HHLA3Q9XRX5 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC13.25□□□□□ -0.29
HHLA3Q9XRX5 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
HHLA3Q9XRX5 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
HHLA3Q9XRX5 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
HHLA3Q9XRX5 BUB3-202ENST00000368859 667 ntTSL 3 BASIC13.25□□□□□ -0.29
HHLA3Q9XRX5 MIR1238-201ENST00000408483 83 ntBASIC13.25□□□□□ -0.29
HHLA3Q9XRX5 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
HHLA3Q9XRX5 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC13.25□□□□□ -0.29
HHLA3Q9XRX5 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
HHLA3Q9XRX5 AP000525.1-201ENST00000608286 694 ntBASIC13.25□□□□□ -0.29
HHLA3Q9XRX5 SNX21-213ENST00000614929 587 ntTSL 5 BASIC13.25□□□□□ -0.29
HHLA3Q9XRX5 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
HHLA3Q9XRX5 AC066615.1-201ENST00000640911 628 ntBASIC13.25□□□□□ -0.29
HHLA3Q9XRX5 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
HHLA3Q9XRX5 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
HHLA3Q9XRX5 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
HHLA3Q9XRX5 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
HHLA3Q9XRX5 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
HHLA3Q9XRX5 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
HHLA3Q9XRX5 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC13.25□□□□□ -0.29
HHLA3Q9XRX5 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
HHLA3Q9XRX5 AC138028.4-201ENST00000564984 1845 ntBASIC13.25□□□□□ -0.29
HHLA3Q9XRX5 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
HHLA3Q9XRX5 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
HHLA3Q9XRX5 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
HHLA3Q9XRX5 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
HHLA3Q9XRX5 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC13.25□□□□□ -0.29
HHLA3Q9XRX5 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
HHLA3Q9XRX5 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC13.24□□□□□ -0.29
HHLA3Q9XRX5 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
HHLA3Q9XRX5 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC13.24□□□□□ -0.29
HHLA3Q9XRX5 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC13.24□□□□□ -0.29
HHLA3Q9XRX5 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
HHLA3Q9XRX5 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
HHLA3Q9XRX5 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC13.24□□□□□ -0.29
HHLA3Q9XRX5 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
HHLA3Q9XRX5 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
HHLA3Q9XRX5 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC13.24□□□□□ -0.29
HHLA3Q9XRX5 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
HHLA3Q9XRX5 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
HHLA3Q9XRX5 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC13.24□□□□□ -0.29
HHLA3Q9XRX5 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
HHLA3Q9XRX5 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
HHLA3Q9XRX5 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
HHLA3Q9XRX5 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
HHLA3Q9XRX5 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC13.24□□□□□ -0.29
HHLA3Q9XRX5 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
HHLA3Q9XRX5 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC13.24□□□□□ -0.29
HHLA3Q9XRX5 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC13.24□□□□□ -0.29
HHLA3Q9XRX5 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
HHLA3Q9XRX5 SLC25A1P2-201ENST00000430693 912 ntBASIC13.24□□□□□ -0.29
HHLA3Q9XRX5 CCR12P-201ENST00000446203 998 ntBASIC13.24□□□□□ -0.29
HHLA3Q9XRX5 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
HHLA3Q9XRX5 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC13.24□□□□□ -0.29
HHLA3Q9XRX5 AL355075.4-201ENST00000554988 638 ntBASIC13.24□□□□□ -0.29
HHLA3Q9XRX5 FITM1-202ENST00000559294 800 ntBASIC13.24□□□□□ -0.29
HHLA3Q9XRX5 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
HHLA3Q9XRX5 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC13.24□□□□□ -0.29
HHLA3Q9XRX5 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC13.24□□□□□ -0.29
HHLA3Q9XRX5 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC13.24□□□□□ -0.29
HHLA3Q9XRX5 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC13.24□□□□□ -0.29
HHLA3Q9XRX5 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC13.24□□□□□ -0.29
HHLA3Q9XRX5 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC13.24□□□□□ -0.29
HHLA3Q9XRX5 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
HHLA3Q9XRX5 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC13.24□□□□□ -0.29
HHLA3Q9XRX5 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
HHLA3Q9XRX5 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
HHLA3Q9XRX5 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
HHLA3Q9XRX5 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
HHLA3Q9XRX5 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
HHLA3Q9XRX5 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
HHLA3Q9XRX5 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
HHLA3Q9XRX5 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
HHLA3Q9XRX5 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
HHLA3Q9XRX5 RCC2P3-201ENST00000418112 1537 ntBASIC13.23□□□□□ -0.29
HHLA3Q9XRX5 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC13.23□□□□□ -0.29
HHLA3Q9XRX5 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
HHLA3Q9XRX5 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
HHLA3Q9XRX5 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
HHLA3Q9XRX5 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
HHLA3Q9XRX5 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
HHLA3Q9XRX5 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
HHLA3Q9XRX5 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
HHLA3Q9XRX5 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
HHLA3Q9XRX5 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
HHLA3Q9XRX5 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
HHLA3Q9XRX5 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
HHLA3Q9XRX5 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
HHLA3Q9XRX5 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC13.23□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms