Protein–RNA interactions for Protein: Q9UPU9

SAMD4A, Protein Smaug homolog 1, humanhuman

Known RBP Predictions only

Length 718 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SAMD4AQ9UPU9 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SAMD4AQ9UPU9 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC16.91■□□□□ 0.3
SAMD4AQ9UPU9 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SAMD4AQ9UPU9 KRT18P23-201ENST00000435622 1283 ntBASIC16.91■□□□□ 0.3
SAMD4AQ9UPU9 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
SAMD4AQ9UPU9 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SAMD4AQ9UPU9 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC16.91■□□□□ 0.3
SAMD4AQ9UPU9 AC006058.3-201ENST00000606217 1069 ntBASIC16.91■□□□□ 0.3
SAMD4AQ9UPU9 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SAMD4AQ9UPU9 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC16.91■□□□□ 0.3
SAMD4AQ9UPU9 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC16.91■□□□□ 0.3
SAMD4AQ9UPU9 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
SAMD4AQ9UPU9 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC16.91■□□□□ 0.3
SAMD4AQ9UPU9 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
SAMD4AQ9UPU9 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SAMD4AQ9UPU9 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
SAMD4AQ9UPU9 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SAMD4AQ9UPU9 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
SAMD4AQ9UPU9 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
SAMD4AQ9UPU9 AP001094.4-201ENST00000579008 2176 ntBASIC16.91■□□□□ 0.3
SAMD4AQ9UPU9 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
SAMD4AQ9UPU9 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
SAMD4AQ9UPU9 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
SAMD4AQ9UPU9 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
SAMD4AQ9UPU9 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
SAMD4AQ9UPU9 OR6D1P-203ENST00000641209 4860 ntBASIC16.9■□□□□ 0.3
SAMD4AQ9UPU9 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
SAMD4AQ9UPU9 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC16.9■□□□□ 0.3
SAMD4AQ9UPU9 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC16.9■□□□□ 0.3
SAMD4AQ9UPU9 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
SAMD4AQ9UPU9 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SAMD4AQ9UPU9 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC16.9■□□□□ 0.3
SAMD4AQ9UPU9 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SAMD4AQ9UPU9 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SAMD4AQ9UPU9 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SAMD4AQ9UPU9 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SAMD4AQ9UPU9 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC16.9■□□□□ 0.3
SAMD4AQ9UPU9 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SAMD4AQ9UPU9 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC16.9■□□□□ 0.3
SAMD4AQ9UPU9 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC16.9■□□□□ 0.3
SAMD4AQ9UPU9 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC16.9■□□□□ 0.3
SAMD4AQ9UPU9 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
SAMD4AQ9UPU9 AC090192.1-201ENST00000517740 490 ntBASIC16.9■□□□□ 0.3
SAMD4AQ9UPU9 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC16.9■□□□□ 0.3
SAMD4AQ9UPU9 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC16.9■□□□□ 0.3
SAMD4AQ9UPU9 TBCB-214ENST00000629269 413 ntTSL 5 BASIC16.9■□□□□ 0.3
SAMD4AQ9UPU9 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SAMD4AQ9UPU9 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC16.9■□□□□ 0.3
SAMD4AQ9UPU9 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC16.9■□□□□ 0.3
SAMD4AQ9UPU9 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC16.9■□□□□ 0.3
SAMD4AQ9UPU9 AC133963.1-201ENST00000504166 1679 ntBASIC16.9■□□□□ 0.3
SAMD4AQ9UPU9 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC16.9■□□□□ 0.3
SAMD4AQ9UPU9 LINC00602-201ENST00000629776 2065 ntBASIC16.9■□□□□ 0.3
SAMD4AQ9UPU9 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SAMD4AQ9UPU9 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC16.9■□□□□ 0.3
SAMD4AQ9UPU9 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
SAMD4AQ9UPU9 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SAMD4AQ9UPU9 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SAMD4AQ9UPU9 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SAMD4AQ9UPU9 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC16.9■□□□□ 0.3
SAMD4AQ9UPU9 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SAMD4AQ9UPU9 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SAMD4AQ9UPU9 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
SAMD4AQ9UPU9 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC16.89■□□□□ 0.3
SAMD4AQ9UPU9 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC16.89■□□□□ 0.3
SAMD4AQ9UPU9 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC16.89■□□□□ 0.3
SAMD4AQ9UPU9 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SAMD4AQ9UPU9 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SAMD4AQ9UPU9 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SAMD4AQ9UPU9 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
SAMD4AQ9UPU9 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC16.89■□□□□ 0.29
SAMD4AQ9UPU9 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SAMD4AQ9UPU9 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SAMD4AQ9UPU9 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC16.89■□□□□ 0.29
SAMD4AQ9UPU9 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
SAMD4AQ9UPU9 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC16.89■□□□□ 0.29
SAMD4AQ9UPU9 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SAMD4AQ9UPU9 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SAMD4AQ9UPU9 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC16.89■□□□□ 0.29
SAMD4AQ9UPU9 DUTP2-201ENST00000519164 463 ntBASIC16.89■□□□□ 0.29
SAMD4AQ9UPU9 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC16.89■□□□□ 0.29
SAMD4AQ9UPU9 KRT18P6-201ENST00000555540 1265 ntBASIC16.89■□□□□ 0.29
SAMD4AQ9UPU9 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC16.89■□□□□ 0.29
SAMD4AQ9UPU9 CYGB-204ENST00000589342 815 ntTSL 3 BASIC16.89■□□□□ 0.29
SAMD4AQ9UPU9 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC16.89■□□□□ 0.29
SAMD4AQ9UPU9 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC16.89■□□□□ 0.29
SAMD4AQ9UPU9 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SAMD4AQ9UPU9 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SAMD4AQ9UPU9 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC16.89■□□□□ 0.29
SAMD4AQ9UPU9 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SAMD4AQ9UPU9 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
SAMD4AQ9UPU9 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
SAMD4AQ9UPU9 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
SAMD4AQ9UPU9 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SAMD4AQ9UPU9 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC16.88■□□□□ 0.29
SAMD4AQ9UPU9 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC16.88■□□□□ 0.29
SAMD4AQ9UPU9 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SAMD4AQ9UPU9 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
SAMD4AQ9UPU9 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC16.88■□□□□ 0.29
SAMD4AQ9UPU9 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms