Protein–RNA interactions for Protein: Q9UPM6

LHX6, LIM/homeobox protein Lhx6, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX6Q9UPM6 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC17.07■□□□□ 0.32
LHX6Q9UPM6 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC17.07■□□□□ 0.32
LHX6Q9UPM6 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
LHX6Q9UPM6 DUX4L17-201ENST00000557360 1267 ntBASIC17.07■□□□□ 0.32
LHX6Q9UPM6 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC17.07■□□□□ 0.32
LHX6Q9UPM6 COPE-211ENST00000600932 1144 ntTSL 5 BASIC17.07■□□□□ 0.32
LHX6Q9UPM6 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
LHX6Q9UPM6 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC17.07■□□□□ 0.32
LHX6Q9UPM6 AC024563.2-201ENST00000603282 481 ntBASIC17.07■□□□□ 0.32
LHX6Q9UPM6 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
LHX6Q9UPM6 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
LHX6Q9UPM6 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
LHX6Q9UPM6 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LHX6Q9UPM6 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LHX6Q9UPM6 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC17.07■□□□□ 0.32
LHX6Q9UPM6 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LHX6Q9UPM6 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC17.07■□□□□ 0.32
LHX6Q9UPM6 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
LHX6Q9UPM6 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
LHX6Q9UPM6 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
LHX6Q9UPM6 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
LHX6Q9UPM6 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
LHX6Q9UPM6 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC17.06■□□□□ 0.32
LHX6Q9UPM6 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LHX6Q9UPM6 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
LHX6Q9UPM6 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC17.06■□□□□ 0.32
LHX6Q9UPM6 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC17.06■□□□□ 0.32
LHX6Q9UPM6 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC17.06■□□□□ 0.32
LHX6Q9UPM6 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LHX6Q9UPM6 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC17.06■□□□□ 0.32
LHX6Q9UPM6 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LHX6Q9UPM6 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LHX6Q9UPM6 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
LHX6Q9UPM6 ALG1L5P-201ENST00000482043 771 ntBASIC17.06■□□□□ 0.32
LHX6Q9UPM6 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
LHX6Q9UPM6 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LHX6Q9UPM6 AC009533.2-201ENST00000543664 586 ntBASIC17.06■□□□□ 0.32
LHX6Q9UPM6 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC17.06■□□□□ 0.32
LHX6Q9UPM6 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC17.06■□□□□ 0.32
LHX6Q9UPM6 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC17.06■□□□□ 0.32
LHX6Q9UPM6 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC17.06■□□□□ 0.32
LHX6Q9UPM6 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC17.06■□□□□ 0.32
LHX6Q9UPM6 AC008735.5-201ENST00000623544 497 ntBASIC17.06■□□□□ 0.32
LHX6Q9UPM6 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC17.06■□□□□ 0.32
LHX6Q9UPM6 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC17.06■□□□□ 0.32
LHX6Q9UPM6 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LHX6Q9UPM6 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LHX6Q9UPM6 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
LHX6Q9UPM6 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
LHX6Q9UPM6 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LHX6Q9UPM6 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LHX6Q9UPM6 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LHX6Q9UPM6 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LHX6Q9UPM6 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LHX6Q9UPM6 AC098818.2-201ENST00000564925 2320 ntBASIC17.05■□□□□ 0.32
LHX6Q9UPM6 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
LHX6Q9UPM6 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LHX6Q9UPM6 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC17.05■□□□□ 0.32
LHX6Q9UPM6 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
LHX6Q9UPM6 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
LHX6Q9UPM6 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
LHX6Q9UPM6 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC17.05■□□□□ 0.32
LHX6Q9UPM6 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LHX6Q9UPM6 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
LHX6Q9UPM6 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
LHX6Q9UPM6 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
LHX6Q9UPM6 KLRF1-201ENST00000279545 1091 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
LHX6Q9UPM6 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
LHX6Q9UPM6 COPE-202ENST00000349893 948 ntTSL 2 BASIC17.05■□□□□ 0.32
LHX6Q9UPM6 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC17.05■□□□□ 0.32
LHX6Q9UPM6 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
LHX6Q9UPM6 PSAT1P2-201ENST00000426107 972 ntBASIC17.05■□□□□ 0.32
LHX6Q9UPM6 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC17.05■□□□□ 0.32
LHX6Q9UPM6 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC17.05■□□□□ 0.32
LHX6Q9UPM6 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC17.05■□□□□ 0.32
LHX6Q9UPM6 AC104390.1-201ENST00000555663 520 ntBASIC17.05■□□□□ 0.32
LHX6Q9UPM6 AC105339.3-201ENST00000560043 636 ntBASIC17.05■□□□□ 0.32
LHX6Q9UPM6 GZMM-202ENST00000592501 941 ntTSL 3 BASIC17.05■□□□□ 0.32
LHX6Q9UPM6 AL136370.1-201ENST00000608166 691 ntBASIC17.05■□□□□ 0.32
LHX6Q9UPM6 KLRF1-208ENST00000617889 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LHX6Q9UPM6 AC093028.1-201ENST00000622998 982 ntBASIC17.05■□□□□ 0.32
LHX6Q9UPM6 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
LHX6Q9UPM6 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC17.05■□□□□ 0.32
LHX6Q9UPM6 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LHX6Q9UPM6 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LHX6Q9UPM6 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
LHX6Q9UPM6 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC17.05■□□□□ 0.32
LHX6Q9UPM6 LBX2-AS1-202ENST00000603175 2083 ntBASIC17.05■□□□□ 0.32
LHX6Q9UPM6 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
LHX6Q9UPM6 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LHX6Q9UPM6 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
LHX6Q9UPM6 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LHX6Q9UPM6 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
LHX6Q9UPM6 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
LHX6Q9UPM6 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LHX6Q9UPM6 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC17.04■□□□□ 0.32
LHX6Q9UPM6 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
LHX6Q9UPM6 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC17.04■□□□□ 0.32
LHX6Q9UPM6 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
LHX6Q9UPM6 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 60.9 ms