Protein–RNA interactions for Protein: Q9UPA5

BSN, Protein bassoon, humanhuman

Predictions only

Length 3,926 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BSNQ9UPA5 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC16.2■□□□□ 0.18
BSNQ9UPA5 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC16.2■□□□□ 0.18
BSNQ9UPA5 TSEN15P1-201ENST00000423257 515 ntBASIC16.2■□□□□ 0.18
BSNQ9UPA5 GSAP-205ENST00000430584 600 ntTSL 5 BASIC16.2■□□□□ 0.18
BSNQ9UPA5 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
BSNQ9UPA5 RIN3-211ENST00000557762 517 ntTSL 3 BASIC16.2■□□□□ 0.18
BSNQ9UPA5 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
BSNQ9UPA5 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
BSNQ9UPA5 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC16.19■□□□□ 0.18
BSNQ9UPA5 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
BSNQ9UPA5 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
BSNQ9UPA5 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
BSNQ9UPA5 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
BSNQ9UPA5 MTCL1P1-201ENST00000446207 792 ntBASIC16.19■□□□□ 0.18
BSNQ9UPA5 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC16.19■□□□□ 0.18
BSNQ9UPA5 LSM12-202ENST00000585388 942 ntTSL 3 BASIC16.19■□□□□ 0.18
BSNQ9UPA5 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
BSNQ9UPA5 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
BSNQ9UPA5 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC16.19■□□□□ 0.18
BSNQ9UPA5 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
BSNQ9UPA5 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
BSNQ9UPA5 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
BSNQ9UPA5 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
BSNQ9UPA5 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
BSNQ9UPA5 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC16.19■□□□□ 0.18
BSNQ9UPA5 UGT1A2P-201ENST00000454886 866 ntBASIC16.19■□□□□ 0.18
BSNQ9UPA5 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC16.19■□□□□ 0.18
BSNQ9UPA5 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC16.19■□□□□ 0.18
BSNQ9UPA5 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
BSNQ9UPA5 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
BSNQ9UPA5 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC16.19■□□□□ 0.18
BSNQ9UPA5 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC16.19■□□□□ 0.18
BSNQ9UPA5 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC16.19■□□□□ 0.18
BSNQ9UPA5 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC16.19■□□□□ 0.18
BSNQ9UPA5 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC16.19■□□□□ 0.18
BSNQ9UPA5 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC16.19■□□□□ 0.18
BSNQ9UPA5 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
BSNQ9UPA5 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC16.19■□□□□ 0.18
BSNQ9UPA5 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC16.19■□□□□ 0.18
BSNQ9UPA5 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
BSNQ9UPA5 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
BSNQ9UPA5 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC16.18■□□□□ 0.18
BSNQ9UPA5 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC16.18■□□□□ 0.18
BSNQ9UPA5 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
BSNQ9UPA5 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC16.18■□□□□ 0.18
BSNQ9UPA5 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
BSNQ9UPA5 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
BSNQ9UPA5 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
BSNQ9UPA5 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
BSNQ9UPA5 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC16.18■□□□□ 0.18
BSNQ9UPA5 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
BSNQ9UPA5 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
BSNQ9UPA5 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
BSNQ9UPA5 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
BSNQ9UPA5 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
BSNQ9UPA5 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
BSNQ9UPA5 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC16.18■□□□□ 0.18
BSNQ9UPA5 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
BSNQ9UPA5 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
BSNQ9UPA5 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
BSNQ9UPA5 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC16.18■□□□□ 0.18
BSNQ9UPA5 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC16.18■□□□□ 0.18
BSNQ9UPA5 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
BSNQ9UPA5 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
BSNQ9UPA5 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
BSNQ9UPA5 AP000344.2-201ENST00000512987 629 ntBASIC16.18■□□□□ 0.18
BSNQ9UPA5 IGHV3-65-201ENST00000523210 341 ntBASIC16.18■□□□□ 0.18
BSNQ9UPA5 AC010654.1-201ENST00000615722 808 ntBASIC16.18■□□□□ 0.18
BSNQ9UPA5 AL513210.1-201ENST00000629608 234 ntBASIC16.18■□□□□ 0.18
BSNQ9UPA5 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC16.18■□□□□ 0.18
BSNQ9UPA5 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC16.18■□□□□ 0.18
BSNQ9UPA5 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
BSNQ9UPA5 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
BSNQ9UPA5 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC16.17■□□□□ 0.18
BSNQ9UPA5 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC16.17■□□□□ 0.18
BSNQ9UPA5 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
BSNQ9UPA5 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
BSNQ9UPA5 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC16.17■□□□□ 0.18
BSNQ9UPA5 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
BSNQ9UPA5 AL022326.1-202ENST00000641533 845 ntBASIC16.17■□□□□ 0.18
BSNQ9UPA5 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
BSNQ9UPA5 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
BSNQ9UPA5 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
BSNQ9UPA5 AL049757.1-201ENST00000616842 1596 ntBASIC16.17■□□□□ 0.18
BSNQ9UPA5 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
BSNQ9UPA5 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
BSNQ9UPA5 METTL26-204ENST00000397665 558 ntTSL 2 BASIC16.17■□□□□ 0.18
BSNQ9UPA5 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
BSNQ9UPA5 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
BSNQ9UPA5 AL035252.4-201ENST00000624174 288 ntBASIC16.17■□□□□ 0.18
BSNQ9UPA5 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
BSNQ9UPA5 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
BSNQ9UPA5 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC16.17■□□□□ 0.18
BSNQ9UPA5 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC16.17■□□□□ 0.18
BSNQ9UPA5 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
BSNQ9UPA5 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
BSNQ9UPA5 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
BSNQ9UPA5 CITED2-204ENST00000618718 901 ntTSL 2 BASIC16.17■□□□□ 0.18
BSNQ9UPA5 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
BSNQ9UPA5 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 59.3 ms