Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
RTN4Q9NQC3 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC21.33■■□□□ 1.01
RTN4Q9NQC3 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1.01
RTN4Q9NQC3 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1.01
RTN4Q9NQC3 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
RTN4Q9NQC3 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC21.33■■□□□ 1.01
RTN4Q9NQC3 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
RTN4Q9NQC3 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
RTN4Q9NQC3 CALM3-202ENST00000391918 702 ntTSL 2 BASIC21.33■■□□□ 1.01
RTN4Q9NQC3 METTL26-203ENST00000397664 604 ntTSL 2 BASIC21.33■■□□□ 1.01
RTN4Q9NQC3 AC004911.1-201ENST00000416316 871 ntBASIC21.33■■□□□ 1.01
RTN4Q9NQC3 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC21.33■■□□□ 1.01
RTN4Q9NQC3 AC133552.2-202ENST00000575694 574 ntBASIC21.33■■□□□ 1.01
RTN4Q9NQC3 AC092723.2-201ENST00000624955 793 ntBASIC21.33■■□□□ 1.01
RTN4Q9NQC3 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC21.33■■□□□ 1.01
RTN4Q9NQC3 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
RTN4Q9NQC3 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1
RTN4Q9NQC3 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1
RTN4Q9NQC3 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC21.33■■□□□ 1
RTN4Q9NQC3 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1
RTN4Q9NQC3 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
RTN4Q9NQC3 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC21.33■■□□□ 1
RTN4Q9NQC3 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC21.33■■□□□ 1
RTN4Q9NQC3 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
RTN4Q9NQC3 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
RTN4Q9NQC3 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC21.32■■□□□ 1
RTN4Q9NQC3 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
RTN4Q9NQC3 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
RTN4Q9NQC3 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC21.32■■□□□ 1
RTN4Q9NQC3 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
RTN4Q9NQC3 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC21.32■■□□□ 1
RTN4Q9NQC3 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC21.32■■□□□ 1
RTN4Q9NQC3 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
RTN4Q9NQC3 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC21.32■■□□□ 1
RTN4Q9NQC3 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
RTN4Q9NQC3 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
RTN4Q9NQC3 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC21.32■■□□□ 1
RTN4Q9NQC3 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
RTN4Q9NQC3 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
RTN4Q9NQC3 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
RTN4Q9NQC3 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC21.32■■□□□ 1
RTN4Q9NQC3 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
RTN4Q9NQC3 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC21.32■■□□□ 1
RTN4Q9NQC3 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC21.31■■□□□ 1
RTN4Q9NQC3 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC21.31■■□□□ 1
RTN4Q9NQC3 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
RTN4Q9NQC3 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
RTN4Q9NQC3 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC21.31■■□□□ 1
RTN4Q9NQC3 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC21.31■■□□□ 1
RTN4Q9NQC3 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC21.31■■□□□ 1
RTN4Q9NQC3 RARRES2P6-201ENST00000567333 442 ntBASIC21.31■■□□□ 1
RTN4Q9NQC3 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC21.31■■□□□ 1
RTN4Q9NQC3 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC21.31■■□□□ 1
RTN4Q9NQC3 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
RTN4Q9NQC3 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC21.31■■□□□ 1
RTN4Q9NQC3 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC21.31■■□□□ 1
RTN4Q9NQC3 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC21.31■■□□□ 1
RTN4Q9NQC3 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
RTN4Q9NQC3 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC21.31■■□□□ 1
RTN4Q9NQC3 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
RTN4Q9NQC3 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
RTN4Q9NQC3 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC21.31■■□□□ 1
RTN4Q9NQC3 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
RTN4Q9NQC3 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC21.31■■□□□ 1
RTN4Q9NQC3 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC21.31■■□□□ 1
RTN4Q9NQC3 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
RTN4Q9NQC3 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC21.3■■□□□ 1
RTN4Q9NQC3 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
RTN4Q9NQC3 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC21.3■■□□□ 1
RTN4Q9NQC3 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
RTN4Q9NQC3 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC21.3■■□□□ 1
RTN4Q9NQC3 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
RTN4Q9NQC3 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC21.3■■□□□ 1
RTN4Q9NQC3 ZNF815P-204ENST00000434898 1737 ntBASIC21.3■■□□□ 1
RTN4Q9NQC3 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
RTN4Q9NQC3 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
RTN4Q9NQC3 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC21.3■■□□□ 1
RTN4Q9NQC3 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC21.3■■□□□ 1
RTN4Q9NQC3 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
RTN4Q9NQC3 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC21.3■■□□□ 1
RTN4Q9NQC3 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC21.3■■□□□ 1
RTN4Q9NQC3 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC21.3■■□□□ 1
RTN4Q9NQC3 IFNA4-201ENST00000421715 978 ntAPPRIS P1 BASIC21.3■■□□□ 1
RTN4Q9NQC3 AL162430.1-201ENST00000480705 870 ntBASIC21.3■■□□□ 1
RTN4Q9NQC3 HES2-206ENST00000489730 730 ntTSL 2 BASIC21.3■■□□□ 1
RTN4Q9NQC3 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC21.3■■□□□ 1
RTN4Q9NQC3 MARS-234ENST00000630571 216 ntTSL 5 BASIC21.3■■□□□ 1
RTN4Q9NQC3 MARS-235ENST00000630803 183 ntTSL 3 BASIC21.3■■□□□ 1
RTN4Q9NQC3 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
RTN4Q9NQC3 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC21.3■■□□□ 1
RTN4Q9NQC3 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC21.3■■□□□ 1
RTN4Q9NQC3 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC21.3■■□□□ 1
RTN4Q9NQC3 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC21.3■■□□□ 1
RTN4Q9NQC3 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
RTN4Q9NQC3 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
RTN4Q9NQC3 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
RTN4Q9NQC3 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC21.3■■□□□ 1
RTN4Q9NQC3 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
RTN4Q9NQC3 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
RTN4Q9NQC3 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms