Protein–RNA interactions for Protein: Q9HCX3

ZNF304, Zinc finger protein 304, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF304Q9HCX3 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
ZNF304Q9HCX3 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
ZNF304Q9HCX3 DUSP5P1-201ENST00000441325 1139 ntBASIC17.14■□□□□ 0.33
ZNF304Q9HCX3 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC17.14■□□□□ 0.33
ZNF304Q9HCX3 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC17.14■□□□□ 0.33
ZNF304Q9HCX3 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC17.14■□□□□ 0.33
ZNF304Q9HCX3 AC012615.1-201ENST00000565797 1299 ntBASIC17.14■□□□□ 0.33
ZNF304Q9HCX3 AC011840.4-201ENST00000578471 627 ntBASIC17.14■□□□□ 0.33
ZNF304Q9HCX3 Z69720.1-201ENST00000601483 472 ntBASIC17.14■□□□□ 0.33
ZNF304Q9HCX3 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ZNF304Q9HCX3 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ZNF304Q9HCX3 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC17.14■□□□□ 0.33
ZNF304Q9HCX3 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC17.14■□□□□ 0.33
ZNF304Q9HCX3 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC17.14■□□□□ 0.33
ZNF304Q9HCX3 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ZNF304Q9HCX3 TNXA-203ENST00000507684 2038 ntBASIC17.14■□□□□ 0.33
ZNF304Q9HCX3 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
ZNF304Q9HCX3 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
ZNF304Q9HCX3 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ZNF304Q9HCX3 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ZNF304Q9HCX3 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
ZNF304Q9HCX3 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC17.14■□□□□ 0.33
ZNF304Q9HCX3 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ZNF304Q9HCX3 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
ZNF304Q9HCX3 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
ZNF304Q9HCX3 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
ZNF304Q9HCX3 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
ZNF304Q9HCX3 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
ZNF304Q9HCX3 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
ZNF304Q9HCX3 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ZNF304Q9HCX3 LINC00602-201ENST00000629776 2065 ntBASIC17.13■□□□□ 0.33
ZNF304Q9HCX3 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
ZNF304Q9HCX3 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ZNF304Q9HCX3 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC17.13■□□□□ 0.33
ZNF304Q9HCX3 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC17.13■□□□□ 0.33
ZNF304Q9HCX3 KIRREL3-AS3-201ENST00000404882 831 ntBASIC17.13■□□□□ 0.33
ZNF304Q9HCX3 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ZNF304Q9HCX3 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
ZNF304Q9HCX3 AC104819.1-201ENST00000504587 486 ntBASIC17.13■□□□□ 0.33
ZNF304Q9HCX3 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ZNF304Q9HCX3 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC17.13■□□□□ 0.33
ZNF304Q9HCX3 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC17.13■□□□□ 0.33
ZNF304Q9HCX3 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
ZNF304Q9HCX3 AC012313.10-201ENST00000623509 926 ntBASIC17.13■□□□□ 0.33
ZNF304Q9HCX3 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC17.13■□□□□ 0.33
ZNF304Q9HCX3 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
ZNF304Q9HCX3 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ZNF304Q9HCX3 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ZNF304Q9HCX3 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
ZNF304Q9HCX3 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ZNF304Q9HCX3 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ZNF304Q9HCX3 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ZNF304Q9HCX3 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
ZNF304Q9HCX3 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
ZNF304Q9HCX3 AC233702.3-201ENST00000578656 1387 ntBASIC17.13■□□□□ 0.33
ZNF304Q9HCX3 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ZNF304Q9HCX3 ESPNP-201ENST00000270691 2015 ntBASIC17.13■□□□□ 0.33
ZNF304Q9HCX3 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ZNF304Q9HCX3 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ZNF304Q9HCX3 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ZNF304Q9HCX3 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
ZNF304Q9HCX3 AC093503.3-201ENST00000624917 2352 ntBASIC17.13■□□□□ 0.33
ZNF304Q9HCX3 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ZNF304Q9HCX3 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
ZNF304Q9HCX3 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
ZNF304Q9HCX3 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC17.12■□□□□ 0.33
ZNF304Q9HCX3 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ZNF304Q9HCX3 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
ZNF304Q9HCX3 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC17.12■□□□□ 0.33
ZNF304Q9HCX3 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC17.12■□□□□ 0.33
ZNF304Q9HCX3 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
ZNF304Q9HCX3 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
ZNF304Q9HCX3 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
ZNF304Q9HCX3 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ZNF304Q9HCX3 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ZNF304Q9HCX3 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
ZNF304Q9HCX3 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ZNF304Q9HCX3 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
ZNF304Q9HCX3 PNN-202ENST00000553331 656 ntTSL 3 BASIC17.12■□□□□ 0.33
ZNF304Q9HCX3 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
ZNF304Q9HCX3 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC17.12■□□□□ 0.33
ZNF304Q9HCX3 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ZNF304Q9HCX3 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
ZNF304Q9HCX3 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ZNF304Q9HCX3 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ZNF304Q9HCX3 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ZNF304Q9HCX3 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
ZNF304Q9HCX3 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ZNF304Q9HCX3 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ZNF304Q9HCX3 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ZNF304Q9HCX3 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ZNF304Q9HCX3 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ZNF304Q9HCX3 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ZNF304Q9HCX3 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
ZNF304Q9HCX3 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC17.12■□□□□ 0.33
ZNF304Q9HCX3 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ZNF304Q9HCX3 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
ZNF304Q9HCX3 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ZNF304Q9HCX3 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC17.11■□□□□ 0.33
ZNF304Q9HCX3 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms