Protein–RNA interactions for Protein: Q9GZT3

SLIRP, SRA stem-loop-interacting RNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 109 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRPQ9GZT3 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
SLIRPQ9GZT3 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC15.89■□□□□ 0.13
SLIRPQ9GZT3 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC15.89■□□□□ 0.13
SLIRPQ9GZT3 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC15.89■□□□□ 0.13
SLIRPQ9GZT3 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC15.89■□□□□ 0.13
SLIRPQ9GZT3 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC15.89■□□□□ 0.13
SLIRPQ9GZT3 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC15.89■□□□□ 0.13
SLIRPQ9GZT3 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SLIRPQ9GZT3 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
SLIRPQ9GZT3 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SLIRPQ9GZT3 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SLIRPQ9GZT3 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC15.89■□□□□ 0.13
SLIRPQ9GZT3 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC15.89■□□□□ 0.13
SLIRPQ9GZT3 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
SLIRPQ9GZT3 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SLIRPQ9GZT3 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
SLIRPQ9GZT3 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SLIRPQ9GZT3 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC15.89■□□□□ 0.13
SLIRPQ9GZT3 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
SLIRPQ9GZT3 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SLIRPQ9GZT3 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC15.89■□□□□ 0.13
SLIRPQ9GZT3 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
SLIRPQ9GZT3 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC15.89■□□□□ 0.13
SLIRPQ9GZT3 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC15.89■□□□□ 0.13
SLIRPQ9GZT3 SDHAP2-201ENST00000455183 2001 ntBASIC15.89■□□□□ 0.13
SLIRPQ9GZT3 AC005915.1-201ENST00000624912 2018 ntBASIC15.89■□□□□ 0.13
SLIRPQ9GZT3 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC15.89■□□□□ 0.13
SLIRPQ9GZT3 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SLIRPQ9GZT3 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SLIRPQ9GZT3 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC15.88■□□□□ 0.13
SLIRPQ9GZT3 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
SLIRPQ9GZT3 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
SLIRPQ9GZT3 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC15.88■□□□□ 0.13
SLIRPQ9GZT3 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
SLIRPQ9GZT3 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
SLIRPQ9GZT3 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
SLIRPQ9GZT3 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
SLIRPQ9GZT3 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC15.88■□□□□ 0.13
SLIRPQ9GZT3 AC105917.1-201ENST00000506637 2539 ntBASIC15.88■□□□□ 0.13
SLIRPQ9GZT3 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SLIRPQ9GZT3 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SLIRPQ9GZT3 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC15.88■□□□□ 0.13
SLIRPQ9GZT3 ISCU-212ENST00000547005 795 ntTSL 3 BASIC15.88■□□□□ 0.13
SLIRPQ9GZT3 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC15.88■□□□□ 0.13
SLIRPQ9GZT3 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
SLIRPQ9GZT3 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC15.88■□□□□ 0.13
SLIRPQ9GZT3 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
SLIRPQ9GZT3 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
SLIRPQ9GZT3 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SLIRPQ9GZT3 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC15.88■□□□□ 0.13
SLIRPQ9GZT3 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
SLIRPQ9GZT3 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SLIRPQ9GZT3 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
SLIRPQ9GZT3 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
SLIRPQ9GZT3 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
SLIRPQ9GZT3 CYP2T1P-202ENST00000641596 2535 ntBASIC15.88■□□□□ 0.13
SLIRPQ9GZT3 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SLIRPQ9GZT3 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
SLIRPQ9GZT3 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC15.87■□□□□ 0.13
SLIRPQ9GZT3 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC15.87■□□□□ 0.13
SLIRPQ9GZT3 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SLIRPQ9GZT3 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
SLIRPQ9GZT3 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC15.87■□□□□ 0.13
SLIRPQ9GZT3 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC15.87■□□□□ 0.13
SLIRPQ9GZT3 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SLIRPQ9GZT3 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC15.87■□□□□ 0.13
SLIRPQ9GZT3 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SLIRPQ9GZT3 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
SLIRPQ9GZT3 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC15.87■□□□□ 0.13
SLIRPQ9GZT3 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SLIRPQ9GZT3 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC15.87■□□□□ 0.13
SLIRPQ9GZT3 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SLIRPQ9GZT3 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
SLIRPQ9GZT3 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC15.87■□□□□ 0.13
SLIRPQ9GZT3 GLRB-205ENST00000512619 728 ntTSL 3 BASIC15.87■□□□□ 0.13
SLIRPQ9GZT3 DBI-210ENST00000542275 757 ntTSL 5 BASIC15.87■□□□□ 0.13
SLIRPQ9GZT3 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC15.87■□□□□ 0.13
SLIRPQ9GZT3 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC15.87■□□□□ 0.13
SLIRPQ9GZT3 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
SLIRPQ9GZT3 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
SLIRPQ9GZT3 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
SLIRPQ9GZT3 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
SLIRPQ9GZT3 AC092068.3-201ENST00000587894 2016 ntBASIC15.87■□□□□ 0.13
SLIRPQ9GZT3 AC005052.1-201ENST00000625181 2492 ntBASIC15.87■□□□□ 0.13
SLIRPQ9GZT3 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SLIRPQ9GZT3 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
SLIRPQ9GZT3 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC15.86■□□□□ 0.13
SLIRPQ9GZT3 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC15.86■□□□□ 0.13
SLIRPQ9GZT3 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SLIRPQ9GZT3 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
SLIRPQ9GZT3 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
SLIRPQ9GZT3 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
SLIRPQ9GZT3 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SLIRPQ9GZT3 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SLIRPQ9GZT3 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC15.86■□□□□ 0.13
SLIRPQ9GZT3 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC15.86■□□□□ 0.13
SLIRPQ9GZT3 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
SLIRPQ9GZT3 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SLIRPQ9GZT3 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
SLIRPQ9GZT3 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms