Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SMOQ99835 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SMOQ99835 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC18.91■□□□□ 0.62
SMOQ99835 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SMOQ99835 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC18.91■□□□□ 0.62
SMOQ99835 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC18.91■□□□□ 0.62
SMOQ99835 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SMOQ99835 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SMOQ99835 COMP-202ENST00000425807 2292 ntTSL 2 BASIC18.9■□□□□ 0.62
SMOQ99835 ABALON-201ENST00000629058 1903 ntBASIC18.9■□□□□ 0.62
SMOQ99835 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SMOQ99835 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SMOQ99835 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
SMOQ99835 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SMOQ99835 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC18.9■□□□□ 0.62
SMOQ99835 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SMOQ99835 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SMOQ99835 AL450487.1-201ENST00000426799 995 ntBASIC18.9■□□□□ 0.62
SMOQ99835 MEG3-211ENST00000452514 461 ntTSL 3 BASIC18.9■□□□□ 0.62
SMOQ99835 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SMOQ99835 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC18.9■□□□□ 0.62
SMOQ99835 UNC93B7-201ENST00000509439 705 ntBASIC18.9■□□□□ 0.62
SMOQ99835 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC18.9■□□□□ 0.62
SMOQ99835 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC18.9■□□□□ 0.62
SMOQ99835 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC18.9■□□□□ 0.62
SMOQ99835 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC18.9■□□□□ 0.62
SMOQ99835 CCNC-219ENST00000627680 896 ntTSL 5 BASIC18.9■□□□□ 0.62
SMOQ99835 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC18.9■□□□□ 0.62
SMOQ99835 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
SMOQ99835 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SMOQ99835 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SMOQ99835 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SMOQ99835 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SMOQ99835 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SMOQ99835 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
SMOQ99835 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC18.9■□□□□ 0.62
SMOQ99835 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SMOQ99835 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SMOQ99835 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
SMOQ99835 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
SMOQ99835 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.62
SMOQ99835 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SMOQ99835 AC135050.7-201ENST00000624508 2218 ntBASIC18.89■□□□□ 0.61
SMOQ99835 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SMOQ99835 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SMOQ99835 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SMOQ99835 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SMOQ99835 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC18.89■□□□□ 0.61
SMOQ99835 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC18.89■□□□□ 0.61
SMOQ99835 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC18.89■□□□□ 0.61
SMOQ99835 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
SMOQ99835 AL354751.1-201ENST00000412768 1863 ntBASIC18.89■□□□□ 0.61
SMOQ99835 CCS-201ENST00000310190 942 ntTSL 5 BASIC18.89■□□□□ 0.61
SMOQ99835 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SMOQ99835 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC18.89■□□□□ 0.61
SMOQ99835 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC18.89■□□□□ 0.61
SMOQ99835 FICD-205ENST00000552758 603 ntTSL 2 BASIC18.89■□□□□ 0.61
SMOQ99835 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC18.89■□□□□ 0.61
SMOQ99835 AC100803.2-201ENST00000562459 1963 ntBASIC18.89■□□□□ 0.61
SMOQ99835 AC022898.2-201ENST00000616822 1312 ntBASIC18.89■□□□□ 0.61
SMOQ99835 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC18.89■□□□□ 0.61
SMOQ99835 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SMOQ99835 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SMOQ99835 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SMOQ99835 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SMOQ99835 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC18.89■□□□□ 0.61
SMOQ99835 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SMOQ99835 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
SMOQ99835 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SMOQ99835 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SMOQ99835 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SMOQ99835 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SMOQ99835 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SMOQ99835 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC18.88■□□□□ 0.61
SMOQ99835 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC18.88■□□□□ 0.61
SMOQ99835 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SMOQ99835 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC18.88■□□□□ 0.61
SMOQ99835 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SMOQ99835 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SMOQ99835 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC18.88■□□□□ 0.61
SMOQ99835 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SMOQ99835 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SMOQ99835 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SMOQ99835 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
SMOQ99835 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
SMOQ99835 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
SMOQ99835 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SMOQ99835 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC18.88■□□□□ 0.61
SMOQ99835 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC18.88■□□□□ 0.61
SMOQ99835 KRT18P31-201ENST00000506277 1292 ntBASIC18.88■□□□□ 0.61
SMOQ99835 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC18.88■□□□□ 0.61
SMOQ99835 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC18.88■□□□□ 0.61
SMOQ99835 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SMOQ99835 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
SMOQ99835 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SMOQ99835 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC18.88■□□□□ 0.61
SMOQ99835 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC18.88■□□□□ 0.61
SMOQ99835 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SMOQ99835 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC18.88■□□□□ 0.61
SMOQ99835 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 72.8 ms