Protein–RNA interactions for Protein: Q96FZ7

CHMP6, Charged multivesicular body protein 6, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6Q96FZ7 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
CHMP6Q96FZ7 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
CHMP6Q96FZ7 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC18.22■□□□□ 0.51
CHMP6Q96FZ7 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
CHMP6Q96FZ7 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
CHMP6Q96FZ7 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CHMP6Q96FZ7 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CHMP6Q96FZ7 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CHMP6Q96FZ7 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
CHMP6Q96FZ7 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC18.22■□□□□ 0.51
CHMP6Q96FZ7 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC18.22■□□□□ 0.51
CHMP6Q96FZ7 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CHMP6Q96FZ7 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
CHMP6Q96FZ7 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
CHMP6Q96FZ7 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC18.22■□□□□ 0.51
CHMP6Q96FZ7 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
CHMP6Q96FZ7 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CHMP6Q96FZ7 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
CHMP6Q96FZ7 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CHMP6Q96FZ7 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC18.21■□□□□ 0.51
CHMP6Q96FZ7 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC18.21■□□□□ 0.51
CHMP6Q96FZ7 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
CHMP6Q96FZ7 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC18.21■□□□□ 0.51
CHMP6Q96FZ7 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC18.21■□□□□ 0.51
CHMP6Q96FZ7 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CHMP6Q96FZ7 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CHMP6Q96FZ7 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CHMP6Q96FZ7 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CHMP6Q96FZ7 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CHMP6Q96FZ7 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CHMP6Q96FZ7 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CHMP6Q96FZ7 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CHMP6Q96FZ7 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC18.21■□□□□ 0.51
CHMP6Q96FZ7 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC18.21■□□□□ 0.51
CHMP6Q96FZ7 CFL2-205ENST00000555765 632 ntTSL 2 BASIC18.21■□□□□ 0.51
CHMP6Q96FZ7 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
CHMP6Q96FZ7 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC18.21■□□□□ 0.51
CHMP6Q96FZ7 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC18.21■□□□□ 0.51
CHMP6Q96FZ7 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CHMP6Q96FZ7 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CHMP6Q96FZ7 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC18.21■□□□□ 0.51
CHMP6Q96FZ7 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC18.21■□□□□ 0.51
CHMP6Q96FZ7 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC18.21■□□□□ 0.51
CHMP6Q96FZ7 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CHMP6Q96FZ7 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
CHMP6Q96FZ7 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC18.21■□□□□ 0.5
CHMP6Q96FZ7 AC105020.1-201ENST00000435356 2205 ntBASIC18.21■□□□□ 0.5
CHMP6Q96FZ7 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC18.21■□□□□ 0.5
CHMP6Q96FZ7 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CHMP6Q96FZ7 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CHMP6Q96FZ7 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
CHMP6Q96FZ7 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
CHMP6Q96FZ7 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC18.2■□□□□ 0.5
CHMP6Q96FZ7 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CHMP6Q96FZ7 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
CHMP6Q96FZ7 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CHMP6Q96FZ7 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
CHMP6Q96FZ7 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC18.2■□□□□ 0.5
CHMP6Q96FZ7 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
CHMP6Q96FZ7 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CHMP6Q96FZ7 TREX2-204ENST00000370212 861 ntTSL 5 BASIC18.2■□□□□ 0.5
CHMP6Q96FZ7 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
CHMP6Q96FZ7 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CHMP6Q96FZ7 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
CHMP6Q96FZ7 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC18.2■□□□□ 0.5
CHMP6Q96FZ7 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CHMP6Q96FZ7 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC18.2■□□□□ 0.5
CHMP6Q96FZ7 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CHMP6Q96FZ7 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
CHMP6Q96FZ7 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
CHMP6Q96FZ7 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CHMP6Q96FZ7 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
CHMP6Q96FZ7 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CHMP6Q96FZ7 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
CHMP6Q96FZ7 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CHMP6Q96FZ7 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CHMP6Q96FZ7 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC18.2■□□□□ 0.5
CHMP6Q96FZ7 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CHMP6Q96FZ7 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
CHMP6Q96FZ7 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC18.2■□□□□ 0.5
CHMP6Q96FZ7 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
CHMP6Q96FZ7 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC18.2■□□□□ 0.5
CHMP6Q96FZ7 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC18.2■□□□□ 0.5
CHMP6Q96FZ7 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CHMP6Q96FZ7 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
CHMP6Q96FZ7 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CHMP6Q96FZ7 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CHMP6Q96FZ7 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
CHMP6Q96FZ7 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CHMP6Q96FZ7 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
CHMP6Q96FZ7 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC18.19■□□□□ 0.5
CHMP6Q96FZ7 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CHMP6Q96FZ7 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC18.19■□□□□ 0.5
CHMP6Q96FZ7 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CHMP6Q96FZ7 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CHMP6Q96FZ7 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
CHMP6Q96FZ7 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CHMP6Q96FZ7 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC18.19■□□□□ 0.5
CHMP6Q96FZ7 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
CHMP6Q96FZ7 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms