Protein–RNA interactions for Protein: Q8TD26

CHD6, Chromodomain-helicase-DNA-binding protein 6, humanhuman

Predictions only

Length 2,715 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6Q8TD26 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CHD6Q8TD26 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CHD6Q8TD26 AL353779.1-201ENST00000434793 351 ntBASIC16.11■□□□□ 0.17
CHD6Q8TD26 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC16.11■□□□□ 0.17
CHD6Q8TD26 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC16.11■□□□□ 0.17
CHD6Q8TD26 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC16.11■□□□□ 0.17
CHD6Q8TD26 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CHD6Q8TD26 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC16.11■□□□□ 0.17
CHD6Q8TD26 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CHD6Q8TD26 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CHD6Q8TD26 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CHD6Q8TD26 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CHD6Q8TD26 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CHD6Q8TD26 RNASE10-201ENST00000328444 717 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
CHD6Q8TD26 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC16.11■□□□□ 0.17
CHD6Q8TD26 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC16.11■□□□□ 0.17
CHD6Q8TD26 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CHD6Q8TD26 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CHD6Q8TD26 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC16.11■□□□□ 0.17
CHD6Q8TD26 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CHD6Q8TD26 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CHD6Q8TD26 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC16.11■□□□□ 0.17
CHD6Q8TD26 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
CHD6Q8TD26 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CHD6Q8TD26 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CHD6Q8TD26 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CHD6Q8TD26 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC16.1■□□□□ 0.17
CHD6Q8TD26 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC16.1■□□□□ 0.17
CHD6Q8TD26 INO80E-210ENST00000567705 880 ntTSL 3 BASIC16.1■□□□□ 0.17
CHD6Q8TD26 MIR4259-201ENST00000584466 101 ntBASIC16.1■□□□□ 0.17
CHD6Q8TD26 APOC4-201ENST00000591600 348 ntTSL 3 BASIC16.1■□□□□ 0.17
CHD6Q8TD26 AF106564.1-201ENST00000607058 2553 ntBASIC16.1■□□□□ 0.17
CHD6Q8TD26 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CHD6Q8TD26 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC16.1■□□□□ 0.17
CHD6Q8TD26 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC16.1■□□□□ 0.17
CHD6Q8TD26 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC16.1■□□□□ 0.17
CHD6Q8TD26 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CHD6Q8TD26 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CHD6Q8TD26 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CHD6Q8TD26 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CHD6Q8TD26 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC16.1■□□□□ 0.17
CHD6Q8TD26 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
CHD6Q8TD26 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CHD6Q8TD26 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC16.1■□□□□ 0.17
CHD6Q8TD26 HIST1H2BPS3-201ENST00000419683 341 ntBASIC16.1■□□□□ 0.17
CHD6Q8TD26 AL671277.1-201ENST00000429656 993 ntBASIC16.1■□□□□ 0.17
CHD6Q8TD26 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC16.1■□□□□ 0.17
CHD6Q8TD26 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CHD6Q8TD26 TBC1D16-203ENST00000570373 961 ntTSL 5 BASIC16.1■□□□□ 0.17
CHD6Q8TD26 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC16.1■□□□□ 0.17
CHD6Q8TD26 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC16.1■□□□□ 0.17
CHD6Q8TD26 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CHD6Q8TD26 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
CHD6Q8TD26 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CHD6Q8TD26 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC16.1■□□□□ 0.17
CHD6Q8TD26 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CHD6Q8TD26 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CHD6Q8TD26 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC16.1■□□□□ 0.17
CHD6Q8TD26 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC16.1■□□□□ 0.17
CHD6Q8TD26 LINC01225-203ENST00000563550 1244 ntBASIC16.1■□□□□ 0.17
CHD6Q8TD26 AC140912.1-201ENST00000577171 1054 ntBASIC16.1■□□□□ 0.17
CHD6Q8TD26 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC16.1■□□□□ 0.17
CHD6Q8TD26 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
CHD6Q8TD26 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
CHD6Q8TD26 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
CHD6Q8TD26 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
CHD6Q8TD26 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CHD6Q8TD26 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
CHD6Q8TD26 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CHD6Q8TD26 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC16.09■□□□□ 0.17
CHD6Q8TD26 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC16.09■□□□□ 0.17
CHD6Q8TD26 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CHD6Q8TD26 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
CHD6Q8TD26 RPL28-204ENST00000431533 590 ntTSL 2 BASIC16.09■□□□□ 0.17
CHD6Q8TD26 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
CHD6Q8TD26 RPS15P9-201ENST00000494093 319 ntBASIC16.09■□□□□ 0.17
CHD6Q8TD26 AC007064.4-201ENST00000637740 555 ntBASIC16.09■□□□□ 0.17
CHD6Q8TD26 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
CHD6Q8TD26 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CHD6Q8TD26 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC16.09■□□□□ 0.17
CHD6Q8TD26 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CHD6Q8TD26 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CHD6Q8TD26 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CHD6Q8TD26 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC16.09■□□□□ 0.17
CHD6Q8TD26 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CHD6Q8TD26 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC16.09■□□□□ 0.17
CHD6Q8TD26 IGHV3-42-201ENST00000520410 361 ntBASIC16.09■□□□□ 0.17
CHD6Q8TD26 REEP4-207ENST00000523293 913 ntTSL 3 BASIC16.09■□□□□ 0.17
CHD6Q8TD26 AC069120.2-201ENST00000524091 540 ntBASIC16.09■□□□□ 0.17
CHD6Q8TD26 FAM86C2P-203ENST00000528684 1004 ntBASIC16.09■□□□□ 0.17
CHD6Q8TD26 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC16.09■□□□□ 0.17
CHD6Q8TD26 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC16.09■□□□□ 0.17
CHD6Q8TD26 SSH2-211ENST00000590153 570 ntTSL 4 BASIC16.09■□□□□ 0.17
CHD6Q8TD26 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CHD6Q8TD26 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CHD6Q8TD26 ADM-208ENST00000534464 1640 ntTSL 2 BASIC16.08■□□□□ 0.17
CHD6Q8TD26 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
CHD6Q8TD26 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
CHD6Q8TD26 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
CHD6Q8TD26 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms