Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
HERC6Q8IVU3 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
HERC6Q8IVU3 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC19.5■□□□□ 0.71
HERC6Q8IVU3 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
HERC6Q8IVU3 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
HERC6Q8IVU3 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
HERC6Q8IVU3 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
HERC6Q8IVU3 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
HERC6Q8IVU3 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
HERC6Q8IVU3 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
HERC6Q8IVU3 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
HERC6Q8IVU3 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
HERC6Q8IVU3 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC19.49■□□□□ 0.71
HERC6Q8IVU3 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
HERC6Q8IVU3 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
HERC6Q8IVU3 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC19.49■□□□□ 0.71
HERC6Q8IVU3 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC19.49■□□□□ 0.71
HERC6Q8IVU3 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
HERC6Q8IVU3 AC116562.4-201ENST00000641316 2276 ntBASIC19.49■□□□□ 0.71
HERC6Q8IVU3 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC19.49■□□□□ 0.71
HERC6Q8IVU3 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC19.49■□□□□ 0.71
HERC6Q8IVU3 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
HERC6Q8IVU3 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
HERC6Q8IVU3 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
HERC6Q8IVU3 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
HERC6Q8IVU3 BEX3-201ENST00000361298 921 ntTSL 2 BASIC19.49■□□□□ 0.71
HERC6Q8IVU3 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
HERC6Q8IVU3 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
HERC6Q8IVU3 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
HERC6Q8IVU3 LBH-203ENST00000404397 543 ntTSL 4 BASIC19.49■□□□□ 0.71
HERC6Q8IVU3 KIRREL3-AS3-201ENST00000404882 831 ntBASIC19.49■□□□□ 0.71
HERC6Q8IVU3 AC023274.1-201ENST00000418278 595 ntBASIC19.49■□□□□ 0.71
HERC6Q8IVU3 CRCP-205ENST00000431089 942 ntTSL 2 BASIC19.49■□□□□ 0.71
HERC6Q8IVU3 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
HERC6Q8IVU3 AC009947.1-201ENST00000444350 727 ntBASIC19.49■□□□□ 0.71
HERC6Q8IVU3 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC19.49■□□□□ 0.71
HERC6Q8IVU3 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC19.49■□□□□ 0.71
HERC6Q8IVU3 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC19.49■□□□□ 0.71
HERC6Q8IVU3 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC19.49■□□□□ 0.71
HERC6Q8IVU3 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC19.49■□□□□ 0.71
HERC6Q8IVU3 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC19.49■□□□□ 0.71
HERC6Q8IVU3 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
HERC6Q8IVU3 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC19.49■□□□□ 0.71
HERC6Q8IVU3 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
HERC6Q8IVU3 BX323043.1-201ENST00000641006 1765 ntBASIC19.49■□□□□ 0.71
HERC6Q8IVU3 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
HERC6Q8IVU3 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
HERC6Q8IVU3 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
HERC6Q8IVU3 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
HERC6Q8IVU3 AC099343.3-201ENST00000605834 2503 ntBASIC19.49■□□□□ 0.71
HERC6Q8IVU3 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
HERC6Q8IVU3 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
HERC6Q8IVU3 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC19.49■□□□□ 0.71
HERC6Q8IVU3 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
HERC6Q8IVU3 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC19.48■□□□□ 0.71
HERC6Q8IVU3 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC19.48■□□□□ 0.71
HERC6Q8IVU3 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
HERC6Q8IVU3 SDHAP2-201ENST00000455183 2001 ntBASIC19.48■□□□□ 0.71
HERC6Q8IVU3 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
HERC6Q8IVU3 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC19.48■□□□□ 0.71
HERC6Q8IVU3 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
HERC6Q8IVU3 CTNS-203ENST00000399306 803 ntTSL 3 BASIC19.48■□□□□ 0.71
HERC6Q8IVU3 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
HERC6Q8IVU3 MSRA-206ENST00000521209 814 ntTSL 3 BASIC19.48■□□□□ 0.71
HERC6Q8IVU3 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
HERC6Q8IVU3 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC19.48■□□□□ 0.71
HERC6Q8IVU3 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
HERC6Q8IVU3 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC19.48■□□□□ 0.71
HERC6Q8IVU3 RPS29-206ENST00000557111 488 ntTSL 2 BASIC19.48■□□□□ 0.71
HERC6Q8IVU3 RNF151-202ENST00000569210 853 ntTSL 2 BASIC19.48■□□□□ 0.71
HERC6Q8IVU3 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC19.48■□□□□ 0.71
HERC6Q8IVU3 MTDHP5-201ENST00000598980 586 ntBASIC19.48■□□□□ 0.71
HERC6Q8IVU3 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
HERC6Q8IVU3 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
HERC6Q8IVU3 AC098818.2-201ENST00000564925 2320 ntBASIC19.48■□□□□ 0.71
HERC6Q8IVU3 LINC00602-201ENST00000629776 2065 ntBASIC19.48■□□□□ 0.71
HERC6Q8IVU3 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
HERC6Q8IVU3 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
HERC6Q8IVU3 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
HERC6Q8IVU3 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
HERC6Q8IVU3 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
HERC6Q8IVU3 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
HERC6Q8IVU3 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC19.47■□□□□ 0.71
HERC6Q8IVU3 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
HERC6Q8IVU3 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
HERC6Q8IVU3 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC19.47■□□□□ 0.71
HERC6Q8IVU3 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
HERC6Q8IVU3 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
HERC6Q8IVU3 AC211486.1-202ENST00000416371 468 ntBASIC19.47■□□□□ 0.71
HERC6Q8IVU3 LAGE3P1-201ENST00000425356 484 ntBASIC19.47■□□□□ 0.71
HERC6Q8IVU3 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
HERC6Q8IVU3 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC19.47■□□□□ 0.71
HERC6Q8IVU3 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC19.47■□□□□ 0.71
HERC6Q8IVU3 AC211476.1-201ENST00000503899 468 ntBASIC19.47■□□□□ 0.71
HERC6Q8IVU3 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
HERC6Q8IVU3 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
HERC6Q8IVU3 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC19.47■□□□□ 0.71
HERC6Q8IVU3 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC19.47■□□□□ 0.71
HERC6Q8IVU3 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
HERC6Q8IVU3 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC19.47■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms