Protein–RNA interactions for Protein: Q86VP3

PACS2, Phosphofurin acidic cluster sorting protein 2, humanhuman

Predictions only

Length 889 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACS2Q86VP3 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PACS2Q86VP3 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC18.2■□□□□ 0.5
PACS2Q86VP3 AC093677.2-201ENST00000600169 1863 ntBASIC18.2■□□□□ 0.5
PACS2Q86VP3 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC18.2■□□□□ 0.5
PACS2Q86VP3 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC18.2■□□□□ 0.5
PACS2Q86VP3 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PACS2Q86VP3 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PACS2Q86VP3 AC007950.2-201ENST00000615045 2347 ntBASIC18.2■□□□□ 0.5
PACS2Q86VP3 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC18.2■□□□□ 0.5
PACS2Q86VP3 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PACS2Q86VP3 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PACS2Q86VP3 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC18.19■□□□□ 0.5
PACS2Q86VP3 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PACS2Q86VP3 BID-213ENST00000615414 2236 ntTSL 5 BASIC18.19■□□□□ 0.5
PACS2Q86VP3 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PACS2Q86VP3 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PACS2Q86VP3 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PACS2Q86VP3 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC18.19■□□□□ 0.5
PACS2Q86VP3 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PACS2Q86VP3 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PACS2Q86VP3 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PACS2Q86VP3 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PACS2Q86VP3 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PACS2Q86VP3 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
PACS2Q86VP3 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PACS2Q86VP3 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC18.19■□□□□ 0.5
PACS2Q86VP3 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PACS2Q86VP3 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
PACS2Q86VP3 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PACS2Q86VP3 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PACS2Q86VP3 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC18.19■□□□□ 0.5
PACS2Q86VP3 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC18.19■□□□□ 0.5
PACS2Q86VP3 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC18.19■□□□□ 0.5
PACS2Q86VP3 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PACS2Q86VP3 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
PACS2Q86VP3 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PACS2Q86VP3 AC233263.1-201ENST00000578059 224 ntBASIC18.19■□□□□ 0.5
PACS2Q86VP3 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PACS2Q86VP3 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC18.19■□□□□ 0.5
PACS2Q86VP3 AL121906.2-201ENST00000621597 723 ntBASIC18.19■□□□□ 0.5
PACS2Q86VP3 FAM197Y4-202ENST00000622692 608 ntBASIC18.19■□□□□ 0.5
PACS2Q86VP3 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC18.19■□□□□ 0.5
PACS2Q86VP3 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
PACS2Q86VP3 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PACS2Q86VP3 CA12-203ENST00000422263 2556 ntTSL 2 BASIC18.19■□□□□ 0.5
PACS2Q86VP3 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC18.19■□□□□ 0.5
PACS2Q86VP3 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PACS2Q86VP3 HCG11-201ENST00000411553 5696 ntBASIC18.18■□□□□ 0.5
PACS2Q86VP3 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC18.18■□□□□ 0.5
PACS2Q86VP3 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PACS2Q86VP3 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PACS2Q86VP3 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC18.18■□□□□ 0.5
PACS2Q86VP3 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PACS2Q86VP3 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC18.18■□□□□ 0.5
PACS2Q86VP3 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PACS2Q86VP3 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PACS2Q86VP3 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC18.18■□□□□ 0.5
PACS2Q86VP3 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC18.18■□□□□ 0.5
PACS2Q86VP3 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PACS2Q86VP3 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PACS2Q86VP3 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC18.18■□□□□ 0.5
PACS2Q86VP3 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
PACS2Q86VP3 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PACS2Q86VP3 GCSHP5-201ENST00000443090 522 ntBASIC18.18■□□□□ 0.5
PACS2Q86VP3 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC18.18■□□□□ 0.5
PACS2Q86VP3 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PACS2Q86VP3 MTDHP1-201ENST00000605323 784 ntBASIC18.18■□□□□ 0.5
PACS2Q86VP3 AL121829.2-201ENST00000620908 328 ntBASIC18.18■□□□□ 0.5
PACS2Q86VP3 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC18.18■□□□□ 0.5
PACS2Q86VP3 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC18.18■□□□□ 0.5
PACS2Q86VP3 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC18.18■□□□□ 0.5
PACS2Q86VP3 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC18.18■□□□□ 0.5
PACS2Q86VP3 AC026691.1-201ENST00000602502 2017 ntBASIC18.18■□□□□ 0.5
PACS2Q86VP3 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
PACS2Q86VP3 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PACS2Q86VP3 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
PACS2Q86VP3 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
PACS2Q86VP3 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
PACS2Q86VP3 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PACS2Q86VP3 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PACS2Q86VP3 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
PACS2Q86VP3 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
PACS2Q86VP3 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PACS2Q86VP3 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
PACS2Q86VP3 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PACS2Q86VP3 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC18.17■□□□□ 0.5
PACS2Q86VP3 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PACS2Q86VP3 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
PACS2Q86VP3 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PACS2Q86VP3 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PACS2Q86VP3 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC18.17■□□□□ 0.5
PACS2Q86VP3 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC18.17■□□□□ 0.5
PACS2Q86VP3 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
PACS2Q86VP3 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PACS2Q86VP3 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC18.17■□□□□ 0.5
PACS2Q86VP3 AC098590.1-201ENST00000468126 897 ntBASIC18.17■□□□□ 0.5
PACS2Q86VP3 RPPH1-201ENST00000516869 333 ntBASIC18.17■□□□□ 0.5
PACS2Q86VP3 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC18.17■□□□□ 0.5
PACS2Q86VP3 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC18.17■□□□□ 0.5
PACS2Q86VP3 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms