Protein–RNA interactions for Protein: Q86UE3

ZNF546, Zinc finger protein 546, humanhuman

Predictions only

Length 836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF546Q86UE3 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
ZNF546Q86UE3 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
ZNF546Q86UE3 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
ZNF546Q86UE3 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC15.05■□□□□ -0
ZNF546Q86UE3 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
ZNF546Q86UE3 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC15.04■□□□□ -0
ZNF546Q86UE3 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC15.04■□□□□ -0
ZNF546Q86UE3 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC15.04■□□□□ -0
ZNF546Q86UE3 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
ZNF546Q86UE3 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC15.04■□□□□ -0
ZNF546Q86UE3 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC15.04■□□□□ -0
ZNF546Q86UE3 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
ZNF546Q86UE3 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC15.04■□□□□ -0
ZNF546Q86UE3 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
ZNF546Q86UE3 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC15.04■□□□□ -0
ZNF546Q86UE3 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
ZNF546Q86UE3 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
ZNF546Q86UE3 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
ZNF546Q86UE3 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
ZNF546Q86UE3 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC15.04■□□□□ -0
ZNF546Q86UE3 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC15.04■□□□□ -0
ZNF546Q86UE3 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC15.04■□□□□ -0
ZNF546Q86UE3 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
ZNF546Q86UE3 AC006015.1-201ENST00000429970 570 ntBASIC15.04■□□□□ -0
ZNF546Q86UE3 PLD4-205ENST00000553861 667 ntTSL 2 BASIC15.04■□□□□ -0
ZNF546Q86UE3 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC15.04■□□□□ -0
ZNF546Q86UE3 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC15.04■□□□□ -0
ZNF546Q86UE3 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
ZNF546Q86UE3 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
ZNF546Q86UE3 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC15.04■□□□□ -0
ZNF546Q86UE3 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC15.04■□□□□ -0
ZNF546Q86UE3 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
ZNF546Q86UE3 LINC02199-201ENST00000506655 2702 ntBASIC15.04■□□□□ -0
ZNF546Q86UE3 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
ZNF546Q86UE3 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC15.04■□□□□ -0
ZNF546Q86UE3 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC15.04■□□□□ -0
ZNF546Q86UE3 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC15.04■□□□□ -0
ZNF546Q86UE3 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC15.04■□□□□ -0
ZNF546Q86UE3 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
ZNF546Q86UE3 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
ZNF546Q86UE3 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
ZNF546Q86UE3 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
ZNF546Q86UE3 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
ZNF546Q86UE3 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
ZNF546Q86UE3 AGK-211ENST00000629555 2765 ntTSL 5 BASIC15.03■□□□□ -0
ZNF546Q86UE3 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC15.03■□□□□ -0
ZNF546Q86UE3 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC15.03■□□□□ -0
ZNF546Q86UE3 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
ZNF546Q86UE3 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC15.03■□□□□ -0
ZNF546Q86UE3 KRT18P55-202ENST00000578578 1546 ntBASIC15.03■□□□□ -0
ZNF546Q86UE3 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC15.03■□□□□ -0
ZNF546Q86UE3 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
ZNF546Q86UE3 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC15.03■□□□□ -0
ZNF546Q86UE3 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
ZNF546Q86UE3 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC15.03■□□□□ -0
ZNF546Q86UE3 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
ZNF546Q86UE3 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
ZNF546Q86UE3 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
ZNF546Q86UE3 AL355312.1-201ENST00000407115 2176 ntBASIC15.03■□□□□ -0
ZNF546Q86UE3 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
ZNF546Q86UE3 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
ZNF546Q86UE3 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC15.03■□□□□ -0
ZNF546Q86UE3 RER1-204ENST00000378518 522 ntTSL 3 BASIC15.03■□□□□ -0
ZNF546Q86UE3 AC093787.1-201ENST00000450396 207 ntBASIC15.03■□□□□ -0
ZNF546Q86UE3 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC15.03■□□□□ -0
ZNF546Q86UE3 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC15.03■□□□□ -0
ZNF546Q86UE3 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC15.03■□□□□ -0
ZNF546Q86UE3 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
ZNF546Q86UE3 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC15.03■□□□□ -0
ZNF546Q86UE3 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC15.03■□□□□ -0
ZNF546Q86UE3 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC15.03■□□□□ -0
ZNF546Q86UE3 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
ZNF546Q86UE3 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
ZNF546Q86UE3 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
ZNF546Q86UE3 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
ZNF546Q86UE3 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
ZNF546Q86UE3 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC15.03■□□□□ -0
ZNF546Q86UE3 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC15.03■□□□□ -0
ZNF546Q86UE3 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC15.03■□□□□ -0
ZNF546Q86UE3 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
ZNF546Q86UE3 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC15.03■□□□□ -0
ZNF546Q86UE3 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC15.03■□□□□ -0
ZNF546Q86UE3 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC15.03■□□□□ -0
ZNF546Q86UE3 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
ZNF546Q86UE3 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
ZNF546Q86UE3 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC15.02■□□□□ -0
ZNF546Q86UE3 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC15.02■□□□□ -0
ZNF546Q86UE3 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
ZNF546Q86UE3 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
ZNF546Q86UE3 KRT8P32-201ENST00000512863 1461 ntBASIC15.02■□□□□ -0
ZNF546Q86UE3 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC15.02■□□□□ -0
ZNF546Q86UE3 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
ZNF546Q86UE3 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
ZNF546Q86UE3 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC15.02■□□□□ -0
ZNF546Q86UE3 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
ZNF546Q86UE3 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC15.02■□□□□ -0
ZNF546Q86UE3 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC15.02■□□□□ -0
ZNF546Q86UE3 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
ZNF546Q86UE3 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
ZNF546Q86UE3 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 55.5 ms